Gene Rfer_2149 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRfer_2149 
Symbol 
ID3961200 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodoferax ferrireducens T118 
KingdomBacteria 
Replicon accessionNC_007908 
Strand
Start bp2332889 
End bp2334355 
Gene Length1467 bp 
Protein Length488 aa 
Translation table11 
GC content65% 
IMG OID637916969 
Producthypothetical protein 
Protein accessionYP_523404 
Protein GI89900933 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG1030] Membrane-bound serine protease (ClpP class) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAATATG CGCTGGCAAT GGCAATCATG GCGATTGCCT TGTTGGTTGC CGCGCAGGAG 
CGTGTGGCAA CACCGGATAA GCCGGTGCCG CGCGCTGTCG CTGCCGCCGT GCCGCTGCTG
ACGGTGAACG GCCCGATAGG ACCGGCCACG GCCGACTACA TTGCGCGCGG TCTGCACAAG
GCCGCCAATG AGCATGCACC GCTGGTGGTG TTGCAAATTG ACACGCCGGG CGGGCTCGAC
AGTTCGACCC GCCAGATCGT CAAGGACATC CTGGCGTCAG TCGTGCCAGT GGCTGCCTGG
GTGGCCCCCG GCGGCGCGCG CGCGGCCAGC GCGGGCGCCT ACATTGTCTA CGCCAGCCAT
GTGGCGGTCA TGGCGCCGGG CACCAACCTG GGTGCTGCCA CACCGGTGCA AATGGGTGGC
TTGCCTGGCG CGCCACAGCA ACCACAGCCC ACGCCTGCCA ACCCGGCCGC GCCGCAGGGC
AAGGCGAGTG AACCCAAAGA CGCCACAGAC ACAGTACGCC CGGCGGCAGA CGCCATGACC
CGCAAAATCG TGCATGACTC GGCGGCCTAT CTGCGCTCGC TGGCACAGAT GCGAGGGCGC
AATGTTGAGT GGGCCGACAG TGCCGTGCGT GACGGGGTCA GCCTGTCGGC CGAAGAAGCG
CAAAACCAGC GGGTGATTGA TTTCATCGCT GCTGATCTGC CCACGCTATT GCAGCGGGCA
CATGGCCGTA CCGTGCAGAT GAGCGACGGT GTTGCGCGCA GCGTGGTCAG CAACGGGATG
CGGACGGTCG CCATGGAGCC TGATTGGCGA ACCCGGCTGC TTGGAATCAT CACCGACCCA
ACCGTGGCCT ACCTGTTGCT GCTGCTCGGC ATCTACGGCA TCTACTTCGA GCTGATGTCG
CCGGGTTTCG GCGTGCCTGG GGTGGCGGGT TCGATCTCGC TCCTGCTGGG CATGTTTGCG
CTGCAAATGC TGCCAGTGAG CTATGCCGGG GTCGCATTGA TCGTGCTCGG TTTTGTGATG
CTGGTGGCTG AGGCCTTGCT GCCCAGCTTT GGTGCGTTGG GGATTGGTGG CACCATTGCC
TTTGTCATCG GCTCGATCAT GTTGATTGAC ACTGACGCGC CGGGTTTCGG TTTACCCGTG
GGGCTGATTG CCACCGTGGC GGTCGTGAAT GGACTGTTTG TGCTGGTTAT GTTCCGGCTC
GCGCTCAAAG CCCGCAAGCG GCCAGTAGTC AGCGGGTCGG AGGAACTGAT AGGCGCGACC
GGCGAGATTC TTGAGGCCTC GCCCCATGAC GCCTGGATGC GTCTGCACAG CGAGCGCTGG
CGTGTGCGCT CGGACTCGGC GCTGCACCGG GGCCAGCGTG TAAGGGTGAC CGGACGCGAG
GGGCTGGTGT TGCAGGTGGA ACCCATGGCG GCTGCGCCCA CCGCGGGCGC TGCGCCAAGG
AGATCATTGA GGGCTTCGGG CCCGTAA
 
Protein sequence
MKYALAMAIM AIALLVAAQE RVATPDKPVP RAVAAAVPLL TVNGPIGPAT ADYIARGLHK 
AANEHAPLVV LQIDTPGGLD SSTRQIVKDI LASVVPVAAW VAPGGARAAS AGAYIVYASH
VAVMAPGTNL GAATPVQMGG LPGAPQQPQP TPANPAAPQG KASEPKDATD TVRPAADAMT
RKIVHDSAAY LRSLAQMRGR NVEWADSAVR DGVSLSAEEA QNQRVIDFIA ADLPTLLQRA
HGRTVQMSDG VARSVVSNGM RTVAMEPDWR TRLLGIITDP TVAYLLLLLG IYGIYFELMS
PGFGVPGVAG SISLLLGMFA LQMLPVSYAG VALIVLGFVM LVAEALLPSF GALGIGGTIA
FVIGSIMLID TDAPGFGLPV GLIATVAVVN GLFVLVMFRL ALKARKRPVV SGSEELIGAT
GEILEASPHD AWMRLHSERW RVRSDSALHR GQRVRVTGRE GLVLQVEPMA AAPTAGAAPR
RSLRASGP