| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_2136 |
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| Symbol | truB |
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| ID | 3962088 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | + |
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| Start bp | 2317103 |
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| End bp | 2318119 |
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| Gene Length | 1017 bp |
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| Protein Length | 338 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 637916956 |
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| Product | tRNA pseudouridine synthase B |
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| Protein accession | YP_523391 |
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| Protein GI | 89900920 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0130] Pseudouridine synthase |
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| TIGRFAM ID | [TIGR00431] tRNA pseudouridine 55 synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0388744 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATGCGC CGCGTGCACG GGTTGCCAGG CGCCCCGTGC ACGGGGTGCT GTTGCTGGAC
AAGCCTTTGG GACTGTCGAG CAATGACGCC TTGCAAAAAG CCAAGTGGCT GTTGCGGGCT
GAGAAGGCCG GCCACACCGG CACGCTCGAT CCACTGGCCA CGGGTCTGTT GCCGCTGTGC
TTTGGTGCCG CCACCAAGTT CAGCCAGCTT CAGCTGGATG CGGACAAAAC GTACGAGGCG
GTGGCGCGGC TGGGTGTGAA AACAAGTACT GGCGACGCCG AGGGCGAGCT CATTGAAGAG
CGGTCGGTGA AGGTGACAGA GCAAGACCTG AGTGATGTGG CGATACGCTT CACCGGGCTG
ATTCGGCAGA TACCGCCGAT GCACAGCGCC TTGAAAAAAG ACGGCAAGGC CCTGTACGAA
TACGCGCGGG CCGGTATCGA GGTGGAGCGG GAAGGTCGTG ACGTCACAAT TTATAAGCTA
AATATGGCTC TAGCCCCCGT GGATACTGAA TATTTAACTA TTAAAATGAT AGTTAAATGC
AGCAAAGGCA CTTACATCCG GACCCTGGCT GAGGATATCG GTGAAGCCCT GGGATGCGGC
GCGCATCTGA CGGCGCTACG CCGGGTTGAG ACGGGTGGCT TCGATGTGGC GCAGTGTGTG
ACGCTGGCGG CATTGGAGGC GATGACGGAT GAAGAGAGAT TGAGCCAGCT GCTGCCGGTG
GAGTCGCTGC TGAGCGAGCA CACGGTCGTC ACGCTGGACA CTGAAAATGC AGGGCGGTTC
CTGAGCGGCT TGCGCCGCCG GGGAAATTGG CCTGACAACG GGCAAGTTGC CGTTTATGGC
GAAAAACCGC GTGCCTTATT GGGCACTGGC CATGTTGTGG CAGGTGAGTT GATACCAGGG
CGGCTATTGA GTCCGCTTGA GATTGAGAAA ATAGTGGGAG ATTGCGAATC GGGGTCCAGC
GTGCTGCACG CAGCCCCGCC CTCAGCCCTC CAGACGACAG ACTTTGACGA GATTTAA
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| Protein sequence | MNAPRARVAR RPVHGVLLLD KPLGLSSNDA LQKAKWLLRA EKAGHTGTLD PLATGLLPLC
FGAATKFSQL QLDADKTYEA VARLGVKTST GDAEGELIEE RSVKVTEQDL SDVAIRFTGL
IRQIPPMHSA LKKDGKALYE YARAGIEVER EGRDVTIYKL NMALAPVDTE YLTIKMIVKC
SKGTYIRTLA EDIGEALGCG AHLTALRRVE TGGFDVAQCV TLAALEAMTD EERLSQLLPV
ESLLSEHTVV TLDTENAGRF LSGLRRRGNW PDNGQVAVYG EKPRALLGTG HVVAGELIPG
RLLSPLEIEK IVGDCESGSS VLHAAPPSAL QTTDFDEI
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