| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_2133 |
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| Symbol | |
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| ID | 3962085 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | + |
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| Start bp | 2312244 |
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| End bp | 2313740 |
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| Gene Length | 1497 bp |
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| Protein Length | 498 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 637916953 |
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| Product | NusA antitermination factor |
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| Protein accession | YP_523388 |
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| Protein GI | 89900917 |
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| COG category | [K] Transcription |
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| COG ID | [COG0195] Transcription elongation factor |
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| TIGRFAM ID | [TIGR01953] transcription termination factor NusA
[TIGR01954] transcription termination factor NusA, C-terminal duplication |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.502906 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATCGCG AAATGTTAAT GCTGGTAGAA GCCATATCCC GTGAAAAAAA CGTGGAGCTT
GATGTGGTGT TTGGCGCAGT TGAAGCGGCG CTGGCGCAGG CAACAAGAAA GATTTACCCC
GGTGATGTCG ACATCCGGGT GGCGCTTGAC CGCGACAGTG GCAACTACGA AACATTTCGT
CGTTGGCATG TGGTGCCCGA TGAGGCGGGC TTGCAGTTGC CCGACCAGGA AATCCTGTTG
TTTGAAGCCA AAGAACAGAT TCCCGACATC GAGGTCGACG AATACATCGA AGAAACGGTC
GAGTCGCTGC CGATTGGCCG TATTGGCGCC ATGGCGGCCA AGCAGGTCAT CCTGCAAAAA
ATCCGCGACG CCGAGCGTGA AATGCTGCTC AATGACTTCA TGTCGCGTGG CGACAATATT
TTTGTTGGCA CCGTCAAGCG CATGGACAAA GGCGACCTCA TCGTCGAGTC AGGCCGCGTT
GAAGGCCGCC TGCGTCGCAC GGAGATGATC CCGAAAGAAA ACTTGCGCGT TGGTGACAGG
GTTCGCGCCA TGATCATGGA AGTCGATCTG ACCTTGCGTG GTGCGCCGAT CATTCTGTCG
CGCTCGGCGC CTGAATTCAT GATCGAGCTG TTCCGTCAGG AAGTGCCCGA GATTGAGCAG
GGCTTGCTGG AGATCAAATC CTGCGCCCGT GATGTCGGTT CCCGCGCCAA GATCGCCGTG
TTGTCGCATG ACAAGCGGGT CGATCCGATT GGCACTTGTG TTGGGGTCCG TGGTACCCGC
GTCAACGGTG TCACCAACGA GTTGGCGGGC GAGCGCGTTG ATATCGTGCT GTGGAGCGAG
GACCCGGCCC AGTTTGTGAT CGGGGCGCTG GCCCCGGCCA ACGTGTCGAG CATTGTGGTG
GACGAAGAGC GCCATGCCAT GGATGTGGTG GTCGACGAGG AGAATCTGGC GATCGCGATC
GGCCGGGGCG GCCAGAACGT GCGCCTGGCC TCCGAGCTGA CCGGCTGGAA GATCAACATC
CTGGATGCGG CCGAGTCGGC CCAGAAACAA GCGAGCGAAA CCGATTCGGG TCGCAAGCTG
TTCATGGAAC ACCTCGATGT GGACGAAGAA ATCGCCGATT TGCTGATTGC CGAAGGCTTT
ACCAGCCTGG AGCAGGTGGC TTACGTGCCG CTGGAAGAAA TGCTCGAAAT CGAGAGCTTC
GACGAAGACA CAGCCAACGA ATTGCGCACC CGTGCCAAGG ATGCGCTGTT GACCATGGAA
ATCGCGCATG AAGAGAGTGT GCAGGCGGTT TCGCTGGATT TGCGCGACCT GCAGGGCCTC
ACCCCTGAGC TGATTGCCAA GCTGGCAACA AGCGGCGTTA ACAACCTGGA CGACCTGGCT
GACCTGGCCG TTGACGAATT GACAGAAATC ACCGGCCAGT CTGCGGACGA TGCCAAGACC
TTGATCATGA AGGCGCGCGA ACATTGGTTT ACCAATGACG CCGCTTCTCA AGAGTAA
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| Protein sequence | MNREMLMLVE AISREKNVEL DVVFGAVEAA LAQATRKIYP GDVDIRVALD RDSGNYETFR
RWHVVPDEAG LQLPDQEILL FEAKEQIPDI EVDEYIEETV ESLPIGRIGA MAAKQVILQK
IRDAEREMLL NDFMSRGDNI FVGTVKRMDK GDLIVESGRV EGRLRRTEMI PKENLRVGDR
VRAMIMEVDL TLRGAPIILS RSAPEFMIEL FRQEVPEIEQ GLLEIKSCAR DVGSRAKIAV
LSHDKRVDPI GTCVGVRGTR VNGVTNELAG ERVDIVLWSE DPAQFVIGAL APANVSSIVV
DEERHAMDVV VDEENLAIAI GRGGQNVRLA SELTGWKINI LDAAESAQKQ ASETDSGRKL
FMEHLDVDEE IADLLIAEGF TSLEQVAYVP LEEMLEIESF DEDTANELRT RAKDALLTME
IAHEESVQAV SLDLRDLQGL TPELIAKLAT SGVNNLDDLA DLAVDELTEI TGQSADDAKT
LIMKAREHWF TNDAASQE
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