| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_2121 |
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| Symbol | |
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| ID | 3962474 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | - |
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| Start bp | 2297499 |
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| End bp | 2298713 |
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| Gene Length | 1215 bp |
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| Protein Length | 404 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637916941 |
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| Product | acetylornithine aminotransferase |
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| Protein accession | YP_523376 |
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| Protein GI | 89900905 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG4992] Ornithine/acetylornithine aminotransferase |
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| TIGRFAM ID | [TIGR00707] acetylornithine and succinylornithine aminotransferases |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.00994118 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATGCAT CTTTCATTGA AGCCGCATCG CCCCACGTCA TGAACACCTA CGGTCGTTTG
CCCATCGCCC TGTCGCATGG TCAGGGCTGC CGCGTTTGGG ATGTCAATGG CAAGTCGTAT
CTGGACGCGC TCGGCGGCAT TGCCGTCAAC ACCCTGGGCC ACAACCATCC CAAGCTGGTG
CCAGCGCTTC AAGACCAGAT CGGCAAAATC ATCCACAGCT GCAACTATTA CCACGTGCCC
AACCAGGAAG TGCTGGCCAA AAAATTGGTC GAGCTGTCGG GCATGAGCAA TGTCTTTTTC
TGCTCCACCG GTCTGGAAGC GAACGAAGCC GCCTTGAAGC TGGCGCGCAA ATTTGGCCAT
GACAAGGGCA TTGAGCGGCC TGAGATTGTG GTTTACGAGA AGGCCTTTCA TGGCCGCTCC
ATCGCCACCC TCAGCGCCAC CGGCAACCCC AAGGTGCAGG CTGGTTTTGG CCCGCTGGTG
GAAGGATTCA TCCGGGTGCC GATCAACAGC ATCGAAAGTC TTCAAGCCGC GACCGAAGGC
AACACAAACG TGGTGGCCGT GTTTCTTGAG GCCATCCAGG GTGAAGGCGG CATCAACCCC
ATGCACATGG ACTATCTCAA GGCGGTACGA CAGCTGTGCG ACGAGCGTGA CTGGCTGCTG
ATGATTGACG AGGTGCAGTG CGGCATGGGC CGCACCGGCA AATGGTTTGC CCATCAATGG
GCGGGCATCG TGCCTGACGT GATGCCCCTG GCCAAGGGCC TGGGCTCGGG TGTGCCAGTC
GGTGCGGTGG TGGCAGGCCC CAAGGCCGCC GCCATTTTTC AGCCCGGCAA CCACGGCACT
ACTTTTGGCG GCAACCCGCT GGCCATGCGG GCGGGGGTCG AGACCATTCG CATCATGGAA
GAAGAGGGTC TGCTTGAGAA CGCAGCACAG GTGGGCAAGC ATCTGGCGGC AGCCCTCGCG
CTTGCGCTGT CTGCCGAGCT GACCTCCGGC GCCATCAAGG AAATTCGGGG GATGGGTTTG
ATGATCGGGG TCGAACTGGC AAAACCCTGC TCCGCCCTGG TCCAGCAATG TGCCGACAAC
GGCCTGCTGA TCAGTGTTAC CGCCGACACC GTCATCCGCC TGGTGCCGCC ACTGATCATG
AGCGCGACCG AAGCCGATGA AGTGGTCAGC ATCCTGTGTC CGCTGATCAA GCAGCTTTTG
ACTGACGCCA GCTGA
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| Protein sequence | MNASFIEAAS PHVMNTYGRL PIALSHGQGC RVWDVNGKSY LDALGGIAVN TLGHNHPKLV
PALQDQIGKI IHSCNYYHVP NQEVLAKKLV ELSGMSNVFF CSTGLEANEA ALKLARKFGH
DKGIERPEIV VYEKAFHGRS IATLSATGNP KVQAGFGPLV EGFIRVPINS IESLQAATEG
NTNVVAVFLE AIQGEGGINP MHMDYLKAVR QLCDERDWLL MIDEVQCGMG RTGKWFAHQW
AGIVPDVMPL AKGLGSGVPV GAVVAGPKAA AIFQPGNHGT TFGGNPLAMR AGVETIRIME
EEGLLENAAQ VGKHLAAALA LALSAELTSG AIKEIRGMGL MIGVELAKPC SALVQQCADN
GLLISVTADT VIRLVPPLIM SATEADEVVS ILCPLIKQLL TDAS
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