| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_2119 |
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| Symbol | |
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| ID | 3962471 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | + |
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| Start bp | 2295148 |
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| End bp | 2296278 |
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| Gene Length | 1131 bp |
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| Protein Length | 376 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 637916938 |
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| Product | extracellular ligand-binding receptor |
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| Protein accession | YP_523374 |
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| Protein GI | 89900903 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.00221988 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAAATGA AATTGAAAAT TACTGTGGTG GCTGCCATTG CAGCCGCTGC CGGTGTTGCC
ATGGCCCAGG AGACGGTCGT CAAGATCGGG CACGTTGCTC CGATTTCCGG TGCCCAGGCG
ACTTATGGCC GGGACAACGA GAATGGCGCC CTGATGGCAG TTGACGATCT GAACGCCGCA
GGCGTCGTGA TCGCAGGCAA GAAAGTCAAG CTGCAATTGG TGGCTGAAGA TGATGCGGCC
GATCCCAAAC AAGGTGCAGC GGTTGCACAA AAACTGTGCG ACGCCAAAGT AAATGGTGTG
GTCGGTCACC TCAACTCGGG CACCACAATT CCCGCATCCA AGATTTACCA TGATTGTGGT
ATTCCCATGG TCACGCCATC GGCGACCAAC CCCAATTTGA CCAAACCCGG CTATAAGACG
ACATTCCGCT TGCTGGCCAA CGACAACTCG CTCGGCGCGG GCCTGGCTTT CTACGCCGCT
GACACTTTGA AGCTCAAGCG CATCGCCGTG ATTGATGACC GTACGGCTTA TGGCCAAGGG
GTCGCTGATA TTTTCAAGAA AACAGCCGCA TCCAAAGGCA TCACGATTGT TGATGAGCAG
TTCACCACTG ACAAGGCGGT TGACTTCATG GCGATCCTGA CGGCCATCAA GGGCAAAAAT
CCGGATGGCG TGTTCTTTGG CGGCATGGAC GCACAAGCTG GTCCCATGTT GCGTCAGATG
GAGCAACTCG GTCTCAACAA TGTCAAGTAT TTTGGCGGTG ATGGTATCTG TACCCAGGAT
CTGATCAAAC AGTCCGCTGG CGCCAAGACA CTTGAAAACG TGATTTGCGC TGAAGGCGGC
GCCTCTCTGG CCAAAATGCC CGGTGGTGTA GCCTGGAAGG CACGTTACGA CGCCAAGTAT
CCCGGCCAGT TTCAGGTTTA CAGCCCTTAT GTCTACGACG CCGTGAATGT GATTGTTGAC
GCCATGAAGC GCGCTGGCAG TGCAGACCCC AAGGTCTATC TCCCCAAATT GGCTGAGACC
AATTACAAAG GTATTACCAC CAATGTGCAG TTCGAGCCGA ATGGCGAGTT GAAGAATCCG
GCTATGACAA TCTACACCTA CAAGGGTGGA AAAAAAGCAG CCTTGAACTG A
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| Protein sequence | MQMKLKITVV AAIAAAAGVA MAQETVVKIG HVAPISGAQA TYGRDNENGA LMAVDDLNAA
GVVIAGKKVK LQLVAEDDAA DPKQGAAVAQ KLCDAKVNGV VGHLNSGTTI PASKIYHDCG
IPMVTPSATN PNLTKPGYKT TFRLLANDNS LGAGLAFYAA DTLKLKRIAV IDDRTAYGQG
VADIFKKTAA SKGITIVDEQ FTTDKAVDFM AILTAIKGKN PDGVFFGGMD AQAGPMLRQM
EQLGLNNVKY FGGDGICTQD LIKQSAGAKT LENVICAEGG ASLAKMPGGV AWKARYDAKY
PGQFQVYSPY VYDAVNVIVD AMKRAGSADP KVYLPKLAET NYKGITTNVQ FEPNGELKNP
AMTIYTYKGG KKAALN
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