| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_2117 |
|---|
| Symbol | |
|---|
| ID | 3962469 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodoferax ferrireducens T118 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007908 |
|---|
| Strand | + |
|---|
| Start bp | 2294285 |
|---|
| End bp | 2294719 |
|---|
| Gene Length | 435 bp |
|---|
| Protein Length | 144 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 637916936 |
|---|
| Product | DNA polymerase III subunit chi |
|---|
| Protein accession | YP_523372 |
|---|
| Protein GI | 89900901 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG2927] DNA polymerase III, chi subunit |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.520432 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACTGAGG TGGCCTTTCA CTTCAATGCA CCCGACCGGG TCGCCTATGC CTGCCGTCTG
CTGCGCAAGG CCGCGGCAAG TGGTGCCAAG CTTGTGGTGA TAGGTTCGCC GGACGTGCTG
CAGCAACTGG ACCGCGCCCT TTGGACGTTT TCAGCCGTTG ATTTTGTGCC ACATTGTTTT
CTGGAGAGTG AGTCACACGT CGTTGCCGCT TCGCCCGTGA TTTTGTCGAC ATCCACCCAT
GCGGTGCCCC ACCAGCAGGT GCTTCTCAAC CTTGGCCAAC TTGTGCCCGA GGGGTTTGAG
CGCTTTGAGC GTGTCATCGA GGTGGTCGGC CAGGAGGACG AAGATCGTCA GTCGGCGCGA
AGCCGCTGGA AAAGTTATGC CGATCGTGGC TACGTCATCA CACGTCATGA TCTGGCTTTG
AAAACGTCGT ACTGA
|
|---|
| Protein sequence | MTEVAFHFNA PDRVAYACRL LRKAAASGAK LVVIGSPDVL QQLDRALWTF SAVDFVPHCF
LESESHVVAA SPVILSTSTH AVPHQQVLLN LGQLVPEGFE RFERVIEVVG QEDEDRQSAR
SRWKSYADRG YVITRHDLAL KTSY
|
|---|
| |