| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_2113 |
|---|
| Symbol | |
|---|
| ID | 3962465 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodoferax ferrireducens T118 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007908 |
|---|
| Strand | - |
|---|
| Start bp | 2290058 |
|---|
| End bp | 2290429 |
|---|
| Gene Length | 372 bp |
|---|
| Protein Length | 123 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 637916932 |
|---|
| Product | cobalamin (vitamin B12) biosynthesis CbiX protein |
|---|
| Protein accession | YP_523368 |
|---|
| Protein GI | 89900897 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG2138] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.716439 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCAACCTC CTATGGTGCG CGGCACCATC CTGCTGGCGC ACGGCTCGCG CGACCCCCTA
TGGCGCAAGC CAATTGAAGC GGTGGCCCAG CGGATGCGCG CCGTGGCCCC TGCGGTGCAA
GTGCGCTGCG CCTACCTGGA ACTCTCGGCT CCCAGTCTGC CCGACAGCGC GACAGAATTG
GCAGCCCTGG GTGTCACGTC GATCACGGTG GTTCCGGTCT TTTTTGGCCT CGGCAAGCAC
ACACGGGACG ATTTGCCACT GCTGATGGCG GCGCTGCAGG CCAGCCATCC ACAGTTGGCG
TTCGATCTGA AGCCAGCGAT CGGAGAGGAC GCACAAGTCA TTGAGTTGAT CGCACGAATA
GCCCTTTCGT GA
|
|---|
| Protein sequence | MQPPMVRGTI LLAHGSRDPL WRKPIEAVAQ RMRAVAPAVQ VRCAYLELSA PSLPDSATEL
AALGVTSITV VPVFFGLGKH TRDDLPLLMA ALQASHPQLA FDLKPAIGED AQVIELIARI
ALS
|
|---|
| |