Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rfer_2109 |
Symbol | |
ID | 3962461 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodoferax ferrireducens T118 |
Kingdom | Bacteria |
Replicon accession | NC_007908 |
Strand | - |
Start bp | 2285394 |
End bp | 2286530 |
Gene Length | 1137 bp |
Protein Length | 378 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637916928 |
Product | glucose sorbosone dehydrogenase |
Protein accession | YP_523364 |
Protein GI | 89900893 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2133] Glucose/sorbosone dehydrogenases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.539395 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCTCGAT CTGTCAGGAC CAGCGCGCTT TGTTTAATCT TGCTGGTGGC AAGCATGGCT CACGTTGGCG CCCAAACGGT GCTCCCCGAC GTGGTGGCCT CCGGCCTGCA AAACCCGTGG GCGGTGGCAT TCCTGCCCGA AGGCCGCTAC CTGGTGACCG AGCGACCTGG GCGCATGCGG GTGATCGAAG CGAACGGCAA AGTGGGTGCC CCGCTGGCCG GCGTACCCAC GGTCGCCGCG GGGGGGCAAG GTGGCTTGCT TGACCTGCTG CTGGACGCCG ACTTTGCCCG CAATCACACG CTGTTTTTCT GCTTCTCCGA GCCCGGCCAG ACCGGCAACA GCACCGCCCT GGCCCGCGCG CGCCTGTCGG ACGACCGCAC ACGGCTGGAA GAGGTCAAGG TCATCTTCAG CCAGAAGCCC AAGGTGGCGA GCAGCCTCCA CTTTGGCTGC CGCGTCGTGG AGAGTCGACA CGGCGGCAAA GCCGACGGCA TGCTGTTTCT GACGCTGGGC GAACGCTTTG TGCGCAAGGA CGACGCGCAG AAGCTGGACA ACCACCTGGG CAAGATCGTG CGCATCCACA AGGACGGCCG CGTACCCGCA GACAACCCGT TTGTCGGTCG CGCCGGTGCC CTGCCCGAAA TCTGGTCTTA CGGCCATCGC AACATCCAAG GCGCCACCCT CGCCCCCGAC AGCACCCTGT GGACGCACGA GCACGGCCCA CAGGGCGGGG ACGAAATCAA CCTGATTCAG CCCGGCAGCA ACTATGGCTG GCCGGTGATC ACCTATGGCG AGAACTATGG CGGCGGCCCC ATTGGTGACG GCATCACCGC CAAAGAGGGT ATGAAGCAGC CGTTGCACTA CTGGGTGCCG TCGATAGCCC CTTCGGGCAT GGCGTTTCTG ACCAGCGAAC GTTATGGCCA TGCCTGGGCC GGCAATCTGT TTGTCGGCTC GCTCAAGTTT GGCTACCTGG ACCGCATCGA GCTGTCAGAG CCGTTCAAAG GAACAGTCGT GCGCGAGCAC AAGCTGCTGG CCGATCTGGG TGAGCGCATC CGCGACGTGC GCCAGGGGCC GGACGGCCTG CTCTATGTGC TGACTGATAA CGCACGGGGA CAGCTCATAC GGCTGGCGCC GCGTTGA
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Protein sequence | MPRSVRTSAL CLILLVASMA HVGAQTVLPD VVASGLQNPW AVAFLPEGRY LVTERPGRMR VIEANGKVGA PLAGVPTVAA GGQGGLLDLL LDADFARNHT LFFCFSEPGQ TGNSTALARA RLSDDRTRLE EVKVIFSQKP KVASSLHFGC RVVESRHGGK ADGMLFLTLG ERFVRKDDAQ KLDNHLGKIV RIHKDGRVPA DNPFVGRAGA LPEIWSYGHR NIQGATLAPD STLWTHEHGP QGGDEINLIQ PGSNYGWPVI TYGENYGGGP IGDGITAKEG MKQPLHYWVP SIAPSGMAFL TSERYGHAWA GNLFVGSLKF GYLDRIELSE PFKGTVVREH KLLADLGERI RDVRQGPDGL LYVLTDNARG QLIRLAPR
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