Gene Rfer_2100 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRfer_2100 
Symbol 
ID3961266 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodoferax ferrireducens T118 
KingdomBacteria 
Replicon accessionNC_007908 
Strand- 
Start bp2274106 
End bp2274711 
Gene Length606 bp 
Protein Length201 aa 
Translation table11 
GC content56% 
IMG OID637916919 
ProductNLP/P60 
Protein accessionYP_523355 
Protein GI89900884 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0791] Cell wall-associated hydrolases (invasion-associated proteins) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.995227 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGAATTT CAGCCACCCT TGCCCTCCTG ATCGCCCTTT TGTTTGCTGC CAGTGCGCAG 
GCCAGTCCGT CAGGGGCGAG TGATGACCTG GATAAATTCT TGATCAATGA AGATCTGCTG 
GCACGCATTG ATCAAGTTCG ACAGTCGGTC GGCCTGAAAG CATCTGAATT GGTCTTCACG 
GCCATGGGTT TTCTGGGTGT TCCCTACCGG CGCGGCGGCA ACACGGCAGA AACCGGCTTT 
GACTGCAGCG GTTTTGTCCG GGCTATGTAT CAGCAAACGG TTGGCTTGAT CTTGCCGCGC 
AAAGCGGAAC AACAGGCGGC AGCCACCAAG GTTATTAAAC GCACCGACCT GCAGCCCGGC 
GATCTGGTGT TCTTTAATAC ACTGCGACGC GCCTTCAGCC ATGTGGGCAT TTACATTGGT 
GAAGGCAAAT TCATTCATTC CCCCAAACCA GGCGCTCAAG TGCGGGTGGA AGACATGGGC 
GTGGCTTACT GGAAGCATCG CTTTGATGGC GCTCGTCGAG TGCAAACTGC CGCACCTGAT 
GCGCCTGCGC CTGCGCCTGC CCTTGAGCCT GAGGCTATGC CGCCAATTGA ACCCACACTG 
CACTGA
 
Protein sequence
MRISATLALL IALLFAASAQ ASPSGASDDL DKFLINEDLL ARIDQVRQSV GLKASELVFT 
AMGFLGVPYR RGGNTAETGF DCSGFVRAMY QQTVGLILPR KAEQQAAATK VIKRTDLQPG 
DLVFFNTLRR AFSHVGIYIG EGKFIHSPKP GAQVRVEDMG VAYWKHRFDG ARRVQTAAPD 
APAPAPALEP EAMPPIEPTL H