Gene Rfer_2095 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRfer_2095 
Symbol 
ID3961261 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodoferax ferrireducens T118 
KingdomBacteria 
Replicon accessionNC_007908 
Strand
Start bp2269128 
End bp2269871 
Gene Length744 bp 
Protein Length247 aa 
Translation table11 
GC content58% 
IMG OID637916914 
ProductUBA/THIF-type NAD/FAD binding protein 
Protein accessionYP_523350 
Protein GI89900879 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG1179] Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 1 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00531734 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGACTG ATCGACGCTT TACCGGGTTG GCACGTCTTT ATGGTGTCTT GGGAGCGCAA 
CGTATCGCTG CAGCGCACGT GGCAGTTATT GGTATTGGCG GTGTCGGTTC TTGGGCTGCG
GAGGCGCTGG CGCGTAGCGG GGTGGGTCAT TTGACGTTGG TTGATCTCGA CCACGTGGCC
GAATCCAATA TCAACCGTCA AATACATGCT GTCGAGGCAA GTTTGGGACA GGCCAAGGTG
CTGGCGATGC GAGACCGGAT TCTTTCCTTT AATCCGGCGT GCCAAGTGAC GTGTATCGAG
GAGTTTGTGG AGCCGGGCAA CTGGCCCACG CTGTTACCCC AGGGCGTTAC AGCAGTCATT
GATGCCTGCG ATCAGGTGAA GGCGAAGACG GCAATGGCGG TGTGGGCGCG AAATACCCGT
ACCCTTTTTA TCTCAGTCGG TGCGGCAGGG GGCAAACGCC AAGCCCATCT GGTTGACATT
GATGATCTCA CACACACAAC CCATGACCCC TTGCTGGCGC AGTTGCGCTA CCGTTTGCGC
AAGGAACACG ATGCGCCGCG TCAAGGAAGA AAAATCGGGG TTGCCTGTGT TTTCAGTCGA
GAGGCGGTGA AAGCCCCTGA CGCATCCTGT GCGGTCGAGG GGGACGGAAC ACTCAATTGC
CATGGCTACG GCTCAGTGGT GAGCGTGACT GCCACCTTTG GTCAGTGTGC CGCAGGCTGG
ATTCTTGACC GACTGGCGGG TTGA
 
Protein sequence
MTTDRRFTGL ARLYGVLGAQ RIAAAHVAVI GIGGVGSWAA EALARSGVGH LTLVDLDHVA 
ESNINRQIHA VEASLGQAKV LAMRDRILSF NPACQVTCIE EFVEPGNWPT LLPQGVTAVI
DACDQVKAKT AMAVWARNTR TLFISVGAAG GKRQAHLVDI DDLTHTTHDP LLAQLRYRLR
KEHDAPRQGR KIGVACVFSR EAVKAPDASC AVEGDGTLNC HGYGSVVSVT ATFGQCAAGW
ILDRLAG