Gene Rfer_2093 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRfer_2093 
Symbol 
ID3961259 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodoferax ferrireducens T118 
KingdomBacteria 
Replicon accessionNC_007908 
Strand
Start bp2267778 
End bp2268311 
Gene Length534 bp 
Protein Length177 aa 
Translation table11 
GC content57% 
IMG OID637916912 
ProductOmpA/MotB 
Protein accessionYP_523348 
Protein GI89900877 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2885] Outer membrane protein and related peptidoglycan-associated (lipo)proteins 
TIGRFAM ID[TIGR02802] peptidoglycan-associated lipoprotein 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.366821 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAACGTA TTTTTTTGAT TCTCGCTGTG ACTGCCTTGA TGGCGGGTTG TGGTTCGACC 
ACGAATCTTG ACGAGGTGCC GGTTGTAGAC AAGACCGGGA CATCGGTGCT GCCGCCTGGC
GCTAACGGTT CCGGGAGCGC GGTTGGCAAG GGTGATGTGA CCTCGGTGGA TGTGGGTGCG
TCGTCGCAAA ATGCGGCCAT TGTTGGGGGG CCTCGGGTTG TTTATTTTGA TTACGACAGC
TATGTGATCA AGCCGGAATT CCAGTCTCTG ATTGAGGTCC ATGCCCGTTA TCTCAAGGCT
GACAAGAGCC GCAAAGTGGC GATTGAAGGC CACACTGACG AGCGTGGTGG TCGGGAATAC
AACCTTGCCC TGGGGCAGAA GCGGGCCGAG GCGGTTCGCA GTGCGCTGGG CCTGCTCGGT
GTCGTCGACA GCCAGGTTGA AGCGGTCAGT TTTGGCAAGG AAAAGCCAGC CGTGCAGGGC
TCTGACGAAG CTGCCATGGC CAAAAACAGG CGTGCCGAAA TTAGATATAA ATAG
 
Protein sequence
MKRIFLILAV TALMAGCGST TNLDEVPVVD KTGTSVLPPG ANGSGSAVGK GDVTSVDVGA 
SSQNAAIVGG PRVVYFDYDS YVIKPEFQSL IEVHARYLKA DKSRKVAIEG HTDERGGREY
NLALGQKRAE AVRSALGLLG VVDSQVEAVS FGKEKPAVQG SDEAAMAKNR RAEIRYK