| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_2092 |
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| Symbol | tolB |
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| ID | 3961258 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | + |
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| Start bp | 2266481 |
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| End bp | 2267758 |
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| Gene Length | 1278 bp |
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| Protein Length | 425 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 637916911 |
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| Product | translocation protein TolB |
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| Protein accession | YP_523347 |
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| Protein GI | 89900876 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0823] Periplasmic component of the Tol biopolymer transport system |
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| TIGRFAM ID | [TIGR02800] tol-pal system beta propeller repeat protein TolB |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.626129 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCAAATGA TGAAAAAGCG GATTTTGTTA TGTTTGTTGG TGGGTATGAC TTGTCTTCCG
GTCCTGGCAC AATTTCGCGT CGAAGTCTCC GGTGTAGGCC TAACGCAGTT GCCAATCGCC
GTCTCGGCCT TTCGCGGTCA AGACAGCGTA CCGCAAAAAA TTGCTGCCAT CGTCCAGGCC
GACTTGGAAC GTAGCGGGCA GTTTCGTGGG GTGGATACGG TTGGAGCGGC ACTCGACGAG
GGCACTCGCC CCGATGTGGC TCTGTGGCGG CAAAAAGGGG CTGACTCGCT GGTGACTGGC
AGCGTGAGCC GTCTGGCTGA CGGCCGGTAT GACGTGCGCT TTCGTCTGTG GGATGTCGTG
CGGGGGCAGG ATCTTGGTGG TCAGAGCTAC GCCGTGACCC AGGCAGATTT GCGCCTGTCA
GCGCATCGCA TTGCCGATTT CATTTATGAA AAACTGACTG GCGATAAAGG TGCATTTTCA
ACGCGCATCA CCTATGTCAC CAAGGCCGCT CAGCGGTATC AGCTGTGGGT TGCGGATGCT
GACGGTGAAA ATGCCCAATC GGCGTTGGCC AGCCCCGAGC CCATCATTTC GCCAGCTTGG
TCGCCTAACG GCAGCCAAAT CGCGTACGTG TCGTTTGAAT CCCGCAAGCC GGTTGTCTAT
ACCCACGACG TCGCCACTGG CAAGCGGCGT CTGATTGCAA ATTTCAGGGG TTCCAACAGT
GCGCCGGCCT GGTCGCCCGA TGGGCGCACA CTGGCCGTTA CGCTGAGCCG CGACGGAGGC
TCTCAGCTGT ATGCCATTGA CGCTGGCGGA GGGGAGCCGC GCCGGCTGGC CCAGAACAGC
AGCATTGACA CGGAGCCGGT TTATGCACCC GATGGTAAAA ACATTTATTT CGTCAGTGAC
CGGGGCGGAG CGCCGCAAAT CTACAGGATG CCAGTCACGG GTGGCGGCGC GGAACGGGTG
ACTTTTACCG GCACTTACAA CATTTCTCCG GCCATCAGCC CGGACGGTCG CTGGCTGGCC
TATATTTCCC GGGTGAGCGG CGCCTTCAAA CTGCATGTCC TGGAGCTTGC AAGTGGCGCA
GTGACCGCGA TTACCGACAC AACCGCAGAC GAAAGCCCCA GTTTTGCGCC GAACAGTCGC
TTGATTGTTT ACGCAACCCA GAGCCAAGGC CGGGAGGCAC TGATGACGGC GACAGTGGAC
GGTAAGGTAA AAGCTCGTCT GGCGGGTCAA AATGGCGATA TTCGCGAACC GGGCTGGGGT
CCGTTCCAGA AGCAATAA
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| Protein sequence | MQMMKKRILL CLLVGMTCLP VLAQFRVEVS GVGLTQLPIA VSAFRGQDSV PQKIAAIVQA
DLERSGQFRG VDTVGAALDE GTRPDVALWR QKGADSLVTG SVSRLADGRY DVRFRLWDVV
RGQDLGGQSY AVTQADLRLS AHRIADFIYE KLTGDKGAFS TRITYVTKAA QRYQLWVADA
DGENAQSALA SPEPIISPAW SPNGSQIAYV SFESRKPVVY THDVATGKRR LIANFRGSNS
APAWSPDGRT LAVTLSRDGG SQLYAIDAGG GEPRRLAQNS SIDTEPVYAP DGKNIYFVSD
RGGAPQIYRM PVTGGGAERV TFTGTYNISP AISPDGRWLA YISRVSGAFK LHVLELASGA
VTAITDTTAD ESPSFAPNSR LIVYATQSQG REALMTATVD GKVKARLAGQ NGDIREPGWG
PFQKQ
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