Gene Rfer_2075 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRfer_2075 
Symbol 
ID3961026 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodoferax ferrireducens T118 
KingdomBacteria 
Replicon accessionNC_007908 
Strand
Start bp2250920 
End bp2251654 
Gene Length735 bp 
Protein Length244 aa 
Translation table11 
GC content61% 
IMG OID637916895 
Producthypothetical protein 
Protein accessionYP_523331 
Protein GI89900860 
COG category[S] Function unknown 
COG ID[COG0217] Uncharacterized conserved protein 
TIGRFAM ID[TIGR01033] DNA-binding regulatory protein, YebC/PmpR family 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.967436 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGCAGGAC ACAGTAAATG GGCCAATATT CAGCACCGCA AGGGCCGCCA GGACGAGAAG 
CGGGGCAAGG TCTGGACCCG AATCATCCGT GAAATCACGG TGGCGGCGCG CGCCGGCGGC
GCTGACCTTG GCACCAACCC GCGCCTGCGC CTGGCGGTGG AGCGCGCCAA GGCGGCCAAC
ATGCCGGCGG ACCGCATCAA GTACAACATT GACAAGGCCA GCGGCACGCT CGAAGGGGTG
CAGTACGAGG AGATTCGCTA CGAAGGCTAC GGCATCGGCG GTGCGGCGAT CCTGGTGGAC
ACCATGACCG ACAACAAGGT GCGCACCGTG GCTGAAGTGC GCCACGCTTT TGCGAAATTT
GGCGGCAACA TGGGCGCGGA AGGCTCGGTG GCGTTCCAGT TCAAACACTG CGGCCAGTTG
ATTTTTGCAC CCGGCACCAA TGAAGACAAG GTGATGGAAG TGGCGCTGGA ATCGGGTGCC
GAAGATGTGA TCACCGATGA CGATGGTGCC ATCGAAGTGC TGACCGCTTA CCCGGATTTT
GAGGCCGTCA AGAATGCGCT GGAAGCCGCG GGCTTGAAAC CGGAGGCGGC CGATGTGACC
ATGCGCGCCG AAAACCCGAT TGAACTCACC GGCGACGATG CGGTGCGGAT GCAGAAATTG
CTCGATGCGC TGGAAGATCT GGACGACGTG CAGGAGATTT ATCACAACGC AGAGATTGAC
GCCGAAGCCC TATGA
 
Protein sequence
MAGHSKWANI QHRKGRQDEK RGKVWTRIIR EITVAARAGG ADLGTNPRLR LAVERAKAAN 
MPADRIKYNI DKASGTLEGV QYEEIRYEGY GIGGAAILVD TMTDNKVRTV AEVRHAFAKF
GGNMGAEGSV AFQFKHCGQL IFAPGTNEDK VMEVALESGA EDVITDDDGA IEVLTAYPDF
EAVKNALEAA GLKPEAADVT MRAENPIELT GDDAVRMQKL LDALEDLDDV QEIYHNAEID
AEAL