Gene Rfer_2069 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRfer_2069 
Symbol 
ID3961020 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodoferax ferrireducens T118 
KingdomBacteria 
Replicon accessionNC_007908 
Strand
Start bp2242843 
End bp2243613 
Gene Length771 bp 
Protein Length256 aa 
Translation table11 
GC content62% 
IMG OID637916889 
Product3-hydroxybutyrate dehydrogenase 
Protein accessionYP_523325 
Protein GI89900854 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only 
COG ID[COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 
TIGRFAM ID[TIGR01963] 3-hydroxybutyrate dehydrogenase 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.343315 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTAAAAG GTAAAACAGC GCTCGTCACC GGATCCACCA GCGGCATCGG TTTGGGGCTG 
GCCAAAGCCC TGGCCGCCCA GGGTGCCAAC ATCGTGCTGA ACGGTTTTGG AGACGTTGAA
GGCCCCAAGG CCGAAGTGGC AGCACTCGGC GTCAAAGTGG CTTACCACGG CGCCGACATG
AGCAAACCGG CCGAAATTGA AGACATGTTG AAATTTGCCG CGGCGCAGTT TGGCCGGGTG
GATATTCTGG TCAACAACGC TGGCATCCAG CACGTGGCCC GGGTCGAGAA CTTCTCGGTG
GAACGCTGGG ACGCCATCAT CGCCATCAAC CTGAGCAGCG CCTTTCATGC CACCCGGCTG
GCGCTGCCGG CGATGCAGAA GGCCAACTGG GGCCGCATCA TCAACGTCGC CTCCGTGCAC
GGCCTGGTGG CCTCGGCTGA AAAATCAGCC TACGTCACGG CCAAGCACGG CGTGGTCGGA
CTGACCAAAG TCACCGCGCT GGAAAACGCC ACCACCGGCG TCACCTGCAA CGCCATCTGC
CCCGGCTGGG TGCTCACGCC GCTGGTGCAA AAACAGGTCG ATGCCAAAGC AGCAGCGGGC
GGCATCAGCA ATGCCGAGGC GATCAAACAC TTGTTGAGTG AAAAGGAGCC GTCGCTGCAA
TTCACCACGC CCGAAGAGCT GGGTGCGCTG GCGGTGTTCT TCTGCTCACC GGCAGGCAAC
AATGTGCGCG GCGTCGCGTG GAATATGGAC GGCGGCTGGG CAGCCCAATA A
 
Protein sequence
MLKGKTALVT GSTSGIGLGL AKALAAQGAN IVLNGFGDVE GPKAEVAALG VKVAYHGADM 
SKPAEIEDML KFAAAQFGRV DILVNNAGIQ HVARVENFSV ERWDAIIAIN LSSAFHATRL
ALPAMQKANW GRIINVASVH GLVASAEKSA YVTAKHGVVG LTKVTALENA TTGVTCNAIC
PGWVLTPLVQ KQVDAKAAAG GISNAEAIKH LLSEKEPSLQ FTTPEELGAL AVFFCSPAGN
NVRGVAWNMD GGWAAQ