| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_2056 |
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| Symbol | |
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| ID | 3962103 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | + |
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| Start bp | 2226393 |
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| End bp | 2227340 |
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| Gene Length | 948 bp |
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| Protein Length | 315 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637916876 |
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| Product | auxin efflux carrier |
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| Protein accession | YP_523312 |
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| Protein GI | 89900841 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0679] Predicted permeases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.503376 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATCAATC CTGTTCTCTC TTCCCTGCTG CCGGTGGTGC TGTTGGTTGC TATTGGTTTT
ATAACTGGCC GCGCAGGCTG GATAAGGGCT GAGGCCATAA AAGACTTGTC AAACCTGGTC
TTCATGGTGC TCACACCGGC GCTGCTGTTT CGCACCATGA GCACGGTGCA CGTGGAGCAG
CTCAACTTCA AACCGGTGCT GATGTACTTT GTGGCGGCCA TGCTGCTGTT TGGCTTCGTT
CTGATTTGGC AAGGGGGAAC GCGCCGCGCG GCGGTGCTGG CGCTGGCTGC CACTTTCAGC
AACACGGTGA TGATTGGCAT CCCGCTGGTG GGGCTGGCTT ATGGCCAGGC CGGCTTGGTG
ACACTGTTCA CCTTGATCTC GGTCCATGCG CTGATGCTGT TGACGTTTGC CACCGTGGTG
CTGGAACTGG CAGTCGCCCG CGAGAAAGTC GCGGCCGGTG GCGGGGGCGG TCAGCACATG
CTGTTGACGG TGCTGGGCGC GGTGCGCAAC GGCATCATTC ATCCGGTGCC TTTGCCCATC
ATCGTGGGCT TGCTGTTTGC ACAAACCGGC CAGGTGATGC CAGCGGTGGT GGATCGCCCG
CTCCAGTTGT TGGGCAACGC TTTTGGCCCG GTGGCCCTGG TGCTGGTTGG GGTAACGCTG
ACCGCTGTGC GCATCGGGGA CCACTTCAAG GCGGCACTGG GTTTGAGTCT GATCAAGAAC
CTGGCGTTCC CGGCGCTGGT GGCGCTGCTG TGCTGGGGTT TGGGCTTGAG TGGCTTGCAG
CTGACCGTGA TGATCGTGAC AGCGGCGCTG CCGATCGGTG CCAATGTGTT CATGTTTTCG
CAGCGTTACC AGGTCGCTGA AGAATTGGTG ACGGCCAGCA TGGCGGTGTC CACCGGCCTG
GGGCTGGTGA CGCTCTCCTT GGTGATGGCG CTGGCGAGCT TGCTCTGA
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| Protein sequence | MINPVLSSLL PVVLLVAIGF ITGRAGWIRA EAIKDLSNLV FMVLTPALLF RTMSTVHVEQ
LNFKPVLMYF VAAMLLFGFV LIWQGGTRRA AVLALAATFS NTVMIGIPLV GLAYGQAGLV
TLFTLISVHA LMLLTFATVV LELAVAREKV AAGGGGGQHM LLTVLGAVRN GIIHPVPLPI
IVGLLFAQTG QVMPAVVDRP LQLLGNAFGP VALVLVGVTL TAVRIGDHFK AALGLSLIKN
LAFPALVALL CWGLGLSGLQ LTVMIVTAAL PIGANVFMFS QRYQVAEELV TASMAVSTGL
GLVTLSLVMA LASLL
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