Gene Rfer_2054 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRfer_2054 
Symbol 
ID3962101 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodoferax ferrireducens T118 
KingdomBacteria 
Replicon accessionNC_007908 
Strand
Start bp2222592 
End bp2223137 
Gene Length546 bp 
Protein Length181 aa 
Translation table11 
GC content65% 
IMG OID637916874 
Productferric uptake regulator family protein 
Protein accessionYP_523310 
Protein GI89900839 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0735] Fe2+/Zn2+ uptake regulation proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCTGCTG TTACCCGCTT GAGTCCACCT GATCCGATTG ACGCTTTGCT GTCAGCCCAC 
GGCCTGCGCC GCACGGGCGC CGCGCGTCTG GTGTTGGGCT GGCTGCTGGC GCATCCTGAC
ACCAGTTACA CCCACGCCCA GTTGCAGACG GCGTTGCAGG ATGCCAGTGC TGCGGATGGA
CAAGGGGCAG GCGAGGGCGG TGGCACACTG GACCGCGTGA CGCTGTACCG CCTGATTGAC
CGGCTGACCC AAGTCGGTCT GCTGCTGTGC CGGGTCGACG TCAATCGGGT GCGCCGTTAC
CAGTCCATGC CCGCCAGCGT GCATGCGTTG CCGCACTTTG AGTGCCAGAG CTGCCACCGC
GACCAGCCTT TGGAAGGTGC GTTGCAGGGC AATGCGCTTG ATTTGGAGGT GGCGGCACAA
AACGCTTTGC AAGCCCTCAA AGCCCTGGGC TACCAGGGCC TGAGCCTGGA TCTGGCGGTG
CGCGGCGTGT GTGCGGACTG TGCAACTGCA GCCTCAATCG CACCGACTCC TGCAGTCACG
CCCTGA
 
Protein sequence
MPAVTRLSPP DPIDALLSAH GLRRTGAARL VLGWLLAHPD TSYTHAQLQT ALQDASAADG 
QGAGEGGGTL DRVTLYRLID RLTQVGLLLC RVDVNRVRRY QSMPASVHAL PHFECQSCHR
DQPLEGALQG NALDLEVAAQ NALQALKALG YQGLSLDLAV RGVCADCATA ASIAPTPAVT
P