Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rfer_2054 |
Symbol | |
ID | 3962101 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodoferax ferrireducens T118 |
Kingdom | Bacteria |
Replicon accession | NC_007908 |
Strand | + |
Start bp | 2222592 |
End bp | 2223137 |
Gene Length | 546 bp |
Protein Length | 181 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637916874 |
Product | ferric uptake regulator family protein |
Protein accession | YP_523310 |
Protein GI | 89900839 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0735] Fe2+/Zn2+ uptake regulation proteins |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCCTGCTG TTACCCGCTT GAGTCCACCT GATCCGATTG ACGCTTTGCT GTCAGCCCAC GGCCTGCGCC GCACGGGCGC CGCGCGTCTG GTGTTGGGCT GGCTGCTGGC GCATCCTGAC ACCAGTTACA CCCACGCCCA GTTGCAGACG GCGTTGCAGG ATGCCAGTGC TGCGGATGGA CAAGGGGCAG GCGAGGGCGG TGGCACACTG GACCGCGTGA CGCTGTACCG CCTGATTGAC CGGCTGACCC AAGTCGGTCT GCTGCTGTGC CGGGTCGACG TCAATCGGGT GCGCCGTTAC CAGTCCATGC CCGCCAGCGT GCATGCGTTG CCGCACTTTG AGTGCCAGAG CTGCCACCGC GACCAGCCTT TGGAAGGTGC GTTGCAGGGC AATGCGCTTG ATTTGGAGGT GGCGGCACAA AACGCTTTGC AAGCCCTCAA AGCCCTGGGC TACCAGGGCC TGAGCCTGGA TCTGGCGGTG CGCGGCGTGT GTGCGGACTG TGCAACTGCA GCCTCAATCG CACCGACTCC TGCAGTCACG CCCTGA
|
Protein sequence | MPAVTRLSPP DPIDALLSAH GLRRTGAARL VLGWLLAHPD TSYTHAQLQT ALQDASAADG QGAGEGGGTL DRVTLYRLID RLTQVGLLLC RVDVNRVRRY QSMPASVHAL PHFECQSCHR DQPLEGALQG NALDLEVAAQ NALQALKALG YQGLSLDLAV RGVCADCATA ASIAPTPAVT P
|
| |