Gene Rfer_2028 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRfer_2028 
Symbol 
ID3963166 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodoferax ferrireducens T118 
KingdomBacteria 
Replicon accessionNC_007908 
Strand
Start bp2187434 
End bp2188282 
Gene Length849 bp 
Protein Length282 aa 
Translation table11 
GC content64% 
IMG OID637916848 
Producthypothetical protein 
Protein accessionYP_523284 
Protein GI89900813 
COG category[R] General function prediction only 
COG ID[COG3176] Putative hemolysin 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.131913 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGAGAGC TACCCAGCCC CACCTTTCCT TTGTCGCCGC TATCTTTGCC CCGGAGCCTG 
TTTCACCGGC CTCACGCGCC TCTGGTTGTA TCGAATCCAC GACCAGTCGC GCCTGTCGAA
CGCGCCGGCC TCGTGGTTTC ATGGGCCCAA CACGCGGACG AAGTGCGGCA AGCGCAGCGC
TTGAGGTTTG CGGTTTTCGC CCGGGAAATG GGGGCCCGGC TGGATACGAC CGTACCCGGC
CACGATGTGG ATTTGTTCGA CAACTATTGT GAGCATCTGC TGGTGCGCGA CGAATCGACC
CTGGAGGTGG TGGGAACCTA CCGCCTGCTC ACGCCGGCCC AGGCCCGGCG CGTCGGCAGC
ACCTACAGCG ACCTTGAGTT TGACCTCACC CGCCTGCGCA GCCTGCGTGA GCGCATGGTG
GAGCTGGGGC GAAGCTGCGT GCATCCAGAC TATCGTCACG GCGGCGTGAT CATGGCCTTG
TGGGGCGCGC TGGCCGAGTT CATGGTGCGC AACAAGCTCG ATACCATGAT TGGCTGCGCC
AGCATTCCGA TGCTGCATAA CGGCATCGTT AGCGGTGATG TGGCCGCCAG CATCTGGCAT
CAACTCAAGG CAACGCATCT GGCACCGATC GAACACCAGG TGCATCCGCG CCTGGCGCTG
CCCGTGGATC GGCTGTACCA CAGCCTGAGC GTCGAGCCGC CGGCCTTGAT CAAGGGCTAT
TTGCGACTGG GCGCCAAGAT TCTGGGGGCG CCCGCCTGGG ACCCGGATTT CAACACGGCC
GACCTCCCCA TGCTGATGCG CATCAACGAC TTGCCGCCGC GCTACCGCAA GCATTTTCTG
GGCGCGTGA
 
Protein sequence
MRELPSPTFP LSPLSLPRSL FHRPHAPLVV SNPRPVAPVE RAGLVVSWAQ HADEVRQAQR 
LRFAVFAREM GARLDTTVPG HDVDLFDNYC EHLLVRDEST LEVVGTYRLL TPAQARRVGS
TYSDLEFDLT RLRSLRERMV ELGRSCVHPD YRHGGVIMAL WGALAEFMVR NKLDTMIGCA
SIPMLHNGIV SGDVAASIWH QLKATHLAPI EHQVHPRLAL PVDRLYHSLS VEPPALIKGY
LRLGAKILGA PAWDPDFNTA DLPMLMRIND LPPRYRKHFL GA