Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rfer_2028 |
Symbol | |
ID | 3963166 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodoferax ferrireducens T118 |
Kingdom | Bacteria |
Replicon accession | NC_007908 |
Strand | + |
Start bp | 2187434 |
End bp | 2188282 |
Gene Length | 849 bp |
Protein Length | 282 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637916848 |
Product | hypothetical protein |
Protein accession | YP_523284 |
Protein GI | 89900813 |
COG category | [R] General function prediction only |
COG ID | [COG3176] Putative hemolysin |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.131913 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGAGAGC TACCCAGCCC CACCTTTCCT TTGTCGCCGC TATCTTTGCC CCGGAGCCTG TTTCACCGGC CTCACGCGCC TCTGGTTGTA TCGAATCCAC GACCAGTCGC GCCTGTCGAA CGCGCCGGCC TCGTGGTTTC ATGGGCCCAA CACGCGGACG AAGTGCGGCA AGCGCAGCGC TTGAGGTTTG CGGTTTTCGC CCGGGAAATG GGGGCCCGGC TGGATACGAC CGTACCCGGC CACGATGTGG ATTTGTTCGA CAACTATTGT GAGCATCTGC TGGTGCGCGA CGAATCGACC CTGGAGGTGG TGGGAACCTA CCGCCTGCTC ACGCCGGCCC AGGCCCGGCG CGTCGGCAGC ACCTACAGCG ACCTTGAGTT TGACCTCACC CGCCTGCGCA GCCTGCGTGA GCGCATGGTG GAGCTGGGGC GAAGCTGCGT GCATCCAGAC TATCGTCACG GCGGCGTGAT CATGGCCTTG TGGGGCGCGC TGGCCGAGTT CATGGTGCGC AACAAGCTCG ATACCATGAT TGGCTGCGCC AGCATTCCGA TGCTGCATAA CGGCATCGTT AGCGGTGATG TGGCCGCCAG CATCTGGCAT CAACTCAAGG CAACGCATCT GGCACCGATC GAACACCAGG TGCATCCGCG CCTGGCGCTG CCCGTGGATC GGCTGTACCA CAGCCTGAGC GTCGAGCCGC CGGCCTTGAT CAAGGGCTAT TTGCGACTGG GCGCCAAGAT TCTGGGGGCG CCCGCCTGGG ACCCGGATTT CAACACGGCC GACCTCCCCA TGCTGATGCG CATCAACGAC TTGCCGCCGC GCTACCGCAA GCATTTTCTG GGCGCGTGA
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Protein sequence | MRELPSPTFP LSPLSLPRSL FHRPHAPLVV SNPRPVAPVE RAGLVVSWAQ HADEVRQAQR LRFAVFAREM GARLDTTVPG HDVDLFDNYC EHLLVRDEST LEVVGTYRLL TPAQARRVGS TYSDLEFDLT RLRSLRERMV ELGRSCVHPD YRHGGVIMAL WGALAEFMVR NKLDTMIGCA SIPMLHNGIV SGDVAASIWH QLKATHLAPI EHQVHPRLAL PVDRLYHSLS VEPPALIKGY LRLGAKILGA PAWDPDFNTA DLPMLMRIND LPPRYRKHFL GA
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