Gene Rfer_2024 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRfer_2024 
Symbol 
ID3961772 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodoferax ferrireducens T118 
KingdomBacteria 
Replicon accessionNC_007908 
Strand
Start bp2183066 
End bp2184565 
Gene Length1500 bp 
Protein Length499 aa 
Translation table11 
GC content60% 
IMG OID637916844 
Productadenylate cyclase 
Protein accessionYP_523280 
Protein GI89900809 
COG category[S] Function unknown 
COG ID[COG3025] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.374055 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAACCAA ATAGTCTCCC GCAGGGTCCA CAAGAAATTG AGCTCAAGCT GGCCTTGCCA 
GGCTCTGATC CCTCGCACCT GGCACAGCAG CTGGCTCAGA TACCCTTGCT GGCGCGGCGC
CAGGCGACCC GCCTGCACCT GCACAATGTT TACTACGATA CGCCGACGCA GGTATTGCGA
CAGGCGCGTA TCGCATTGCG AATACGGCGT GTTGGCAGCG ATGCAAAACC GCAATGGCTA
CAGACCCTCA AAATGGGGGG GCTTGGTGAC TCGGCGCTGA GCCAGCGTGG TGAATGGGAA
GTGAGCGTGC CGGATGCCAG GCTCGACTTG CAGGCGCTCC AGGCGACCCC CTGGAGCGAT
ATCGATCCTG ATGGAAGCGT GTTTCAGTCC CTGGTGCCAA GTTTCTCAAC GGTCTTCGAC
CGAACAATCT GGCTCATTCG AAAACACGAC GGCAGCGTGG TCGAGGTCGC GCTGGACCTT
GGGCAAATAG AAGCCAATCA CTTGAATTCA CCAATTTGCG AATTGGAGCT TGAATTGCTC
GCAGGCTCAC CCCTTGCCCT GTTTGACATC GCCCGACAAA TTGCGAAGAC AACTGCCGTA
TTGCCAGCCA ATGCCAGCAA GGCCGAGCGT GGCTACACCC TGGCCGACGG CTGCCTGGAC
AAGCCACTGC GCGCCCAGCC CCCCAGTCTG ACACCCAAGC TCTCATTACA CGAGACGACG
CGGCGAGTAT TGCGTGAGAT GTTCTGCCAG TTCACCACCA ACCTTGGCCT GCTATGCAAC
TCTGACAACC CCGAGGTGGT GCACCAGGCC CGGGTCGGCT GGCGACGCTT TAAAAGTGCT
TTGCGACTTT TCAAGGTAAG CCTCCCAGGC AACGCGACGC CATCGTGGCA AGCGCTACGG
CCGCTATTAA ATCTTCTAGG TGACGTGCGC AATTTCGACG TAGCCTGCAC CGAAACGCTG
CCCCCGCTCG GCGCCGCCTA TGCCGCCGGA GACAGCCAAC GGGCACAAAC CTGGCACACG
ATGGAGCAGG CCCTGACCCA GGCCGCCATG CGCCAGCGCG AACTCGCGCG CGAGGCGCTC
CAGCGGCCCG CGGTCGGCGC AAGCCTGCTT GAAATCACGC AATGGCTCGA AGGATGGTCA
ACTTTGAAGG CGCCGGACGA AGTCGCGCTT GAACCCAAAG AACCCCTGCG GGGCTGGGCC
AGGCGTCGAA TCAAGCGCCT GCATGATCAG CTGCAGCTCG CCCTGCGTGA CACCAGCGAC
CCGGACAGTC AGCACCATGC TCGCATCATT GCCAAGCGAA TGCGCTACGG CATCGAAGCA
TTGCAGCCGC TGCTACCCAA AAAGCGCTCG CAACGCTGGC ATGAACAGGC GACCGAGCTT
CAATTGAGTA TTGGCGCAGC ACGCGATGTC AGTCTGGCCA TCACCCTGGT TGCCAAGCTA
AAAATAGAAC CCGGCGTGCT TGATTTCTTG CGTGGCGTCG CGGTCGGCAG ACAAACGTGA
 
Protein sequence
MKPNSLPQGP QEIELKLALP GSDPSHLAQQ LAQIPLLARR QATRLHLHNV YYDTPTQVLR 
QARIALRIRR VGSDAKPQWL QTLKMGGLGD SALSQRGEWE VSVPDARLDL QALQATPWSD
IDPDGSVFQS LVPSFSTVFD RTIWLIRKHD GSVVEVALDL GQIEANHLNS PICELELELL
AGSPLALFDI ARQIAKTTAV LPANASKAER GYTLADGCLD KPLRAQPPSL TPKLSLHETT
RRVLREMFCQ FTTNLGLLCN SDNPEVVHQA RVGWRRFKSA LRLFKVSLPG NATPSWQALR
PLLNLLGDVR NFDVACTETL PPLGAAYAAG DSQRAQTWHT MEQALTQAAM RQRELAREAL
QRPAVGASLL EITQWLEGWS TLKAPDEVAL EPKEPLRGWA RRRIKRLHDQ LQLALRDTSD
PDSQHHARII AKRMRYGIEA LQPLLPKKRS QRWHEQATEL QLSIGAARDV SLAITLVAKL
KIEPGVLDFL RGVAVGRQT