Gene Rfer_2023 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRfer_2023 
Symbol 
ID3961771 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodoferax ferrireducens T118 
KingdomBacteria 
Replicon accessionNC_007908 
Strand+ 
Start bp2182392 
End bp2182952 
Gene Length561 bp 
Protein Length186 aa 
Translation table11 
GC content59% 
IMG OID637916843 
Productcytochrome B561 
Protein accessionYP_523279 
Protein GI89900808 
COG category[C] Energy production and conversion 
COG ID[COG3038] Cytochrome B561 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.971591 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTTTTA GAAAAACAAT GGATCGATAT CACTTGGCGT CAATATCGCT GCATTGGCTG 
ATGCTTGCCT TGTTTATCGG CGTGTATGCC AGCATCAATT TGCGCGAGCT TTTTGACAAG 
GGCAGCGTGC CCCGTGAGGC CTTGAAAAGC CTGCACTTCA TGCTGGGTCT TCTCATGTTT 
GCCCTGGTTT GGCTGCGCCT GGCAATGCGC GCGATCTACC CCGCGCCGCG CCCGCAAGCC 
GCCCTGCCTC AGTGGCAAGC GATGGCCGGC AAACTGGCCC ACCTGGTGCT GTACGCCATC 
ATGATTGGCA TGCCGCTGCT GGGCTGGCTC ATGCTGAGTG CGGCCGGCAA ACCCATTCCA 
TTTTTTGGTT TGGCGCTCCC GGCGCTGATC GGGCCAGACA AGGCGTTGGC GGGCCAGCTC 
AAGGAAATCC ATGAGTTCGT GGGGACCGCC GGCTACTTCC TGATCGGTGG CCATGCGGCG 
GCAGCCTTAT TCCATCACTA CGTCCAGCGC GACAACACCT TGCTGCGCAT GTGGCCAGGT 
TCCAGGAAAT TGGCCACATG A
 
Protein sequence
MTFRKTMDRY HLASISLHWL MLALFIGVYA SINLRELFDK GSVPREALKS LHFMLGLLMF 
ALVWLRLAMR AIYPAPRPQA ALPQWQAMAG KLAHLVLYAI MIGMPLLGWL MLSAAGKPIP 
FFGLALPALI GPDKALAGQL KEIHEFVGTA GYFLIGGHAA AALFHHYVQR DNTLLRMWPG 
SRKLAT