Gene Rfer_2013 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRfer_2013 
SymbolglmM 
ID3961761 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodoferax ferrireducens T118 
KingdomBacteria 
Replicon accessionNC_007908 
Strand
Start bp2170275 
End bp2171606 
Gene Length1332 bp 
Protein Length443 aa 
Translation table11 
GC content60% 
IMG OID637916833 
Productphosphoglucosamine mutase 
Protein accessionYP_523269 
Protein GI89900798 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1109] Phosphomannomutase 
TIGRFAM ID[TIGR01455] phosphoglucosamine mutase 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.993566 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTAGAA AATATTTTGG CACGGATGGT ATTCGCGGCA CGGTTGGGCA AGCGCCCATC 
ACCCCTGATT TTGTGTTGCG TCTGGCCCAC GCGGTGGGTC GCGTGCTCAA AAAATCAGAA
GCGCGTCCGA CCGTGCTAAT TGGCAAGGAC ACCCGCATCT CGGGCTACAT GCTGGAGAGC
GCGCTGGAGA GTGGTTTCAA TTCTGCCGGT GTCGATGTCG TGTTGCTGGG TCCCTTGCCG
ACACCGGGCG TGGCCTACCT CACGCGCGCT CAGCGAGCCT CGCTGGGCGT GGTCATCAGC
GCCAGCCACA ACCCCTTTGC CGACAATGGC ATTAAGTTTT TCAGTGCTCA GGGCAGCAAA
CTGCCAGACG TTTGGGAGCA TGACGTGGAG GCTGCGCTGG ATGAGCCACC GGTATGGGCT
GATTCCGCCA GCCTGGGCAA GACGCGGCGA CTCGATGATG CCGCAGGCCG CTACATTGAA
TTTTGCAAAA GTACATTTGC CAACGACCTC ACGCTCAAGG GGCTCAAAAT CGTGGTGGAT
GCTGCGCACG GTGCGGCCTA CCAGGTGGCG CCCAAGGTGT TTCACGAATT GGGGGCAGAA
GTCGTCGCCA TTGGCTGTTC GCCCGACGGT TTAAACATCA ACCACGAGGT GGGAGCCACA
CATCCGCAGG CCTTGATTGA AGCCGTCAAG GCGCACCAAG CTGATTTTGG TGTGGCGCTC
GATGGCGATG CTGATCGTCT GCAGTTGGTT GACCATGCGG GTCGTCTGTA CAACGGAGAT
GAGCTGTTAT ATCTGTTGGT GGACGAGCGA CTGGGACGCG ATGAACCGGT ACCGGGTGTG
GTGGGTACCT TGATGACCAA TATGGCCGTG GAGGTGGCGC TTCGAGCCCG TGGGGTGCAG
TTTGTGCGCG CCAAGGTGGG GGATCGTTAT GTGCTGGAAG AGCTTGAAAA GCACAAGTGG
CTGCTTGGCG GAGAAGGCTC TGGCCACTTG CTGGCGCTGG ACAAACATAC CACCGGCGAT
GGGCTAATCT CGGCTCTGCA GGTGTTGCAA GCCTGCGTAC GCAGCGGGAA GAAGTTGGCT
GAGTTGCTCG CTGAAGTAAC ACTGTTTCCG CAGACGCTGA TCAATGTCCG CTTGCAGCCC
GGCCAGGACT GGCAAGTCAG CGCCAACCTG GCCAGCGAAT CTCGGGCGGT GGAGACAGAA
CTGGGTGCCG CGGGCCGATT GCTGATTCGT GCCAGTGGCA CAGAGCCCTT GGTGCGCGTG
ATGGTGGAGG CGCGTGATGC CGTCCAGGCC AGGGCGTGCG CCGAGCGGAT TGCCAACACC
CTCTCGGTAT GA
 
Protein sequence
MTRKYFGTDG IRGTVGQAPI TPDFVLRLAH AVGRVLKKSE ARPTVLIGKD TRISGYMLES 
ALESGFNSAG VDVVLLGPLP TPGVAYLTRA QRASLGVVIS ASHNPFADNG IKFFSAQGSK
LPDVWEHDVE AALDEPPVWA DSASLGKTRR LDDAAGRYIE FCKSTFANDL TLKGLKIVVD
AAHGAAYQVA PKVFHELGAE VVAIGCSPDG LNINHEVGAT HPQALIEAVK AHQADFGVAL
DGDADRLQLV DHAGRLYNGD ELLYLLVDER LGRDEPVPGV VGTLMTNMAV EVALRARGVQ
FVRAKVGDRY VLEELEKHKW LLGGEGSGHL LALDKHTTGD GLISALQVLQ ACVRSGKKLA
ELLAEVTLFP QTLINVRLQP GQDWQVSANL ASESRAVETE LGAAGRLLIR ASGTEPLVRV
MVEARDAVQA RACAERIANT LSV