Gene Rfer_2012 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRfer_2012 
Symbol 
ID3961760 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodoferax ferrireducens T118 
KingdomBacteria 
Replicon accessionNC_007908 
Strand
Start bp2169355 
End bp2170233 
Gene Length879 bp 
Protein Length292 aa 
Translation table11 
GC content60% 
IMG OID637916832 
Productdihydropteroate synthase 
Protein accessionYP_523268 
Protein GI89900797 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0294] Dihydropteroate synthase and related enzymes 
TIGRFAM ID[TIGR01496] dihydropteroate synthase 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAATGGA ACACGGCCCG ATTCCTGATT GACCTCAGCC GCCCCCAGGT GATGGGCATT 
GTCAATATCA CACCCGATTC GTTCTCGGAC GGTGGTCAGC ACGCATCCAC CGCAGCGGCT
CTGCGGCACT GTGAGACGCT GCTCAAAGAG GGGGCTGACA TTCTGGATAT CGGGGGGGAG
TCGACCCGTC CCGGCGCTTT GTCCTTGCCA CTGGATGAGG AGTTGGCGCG GGTGCTGCCT
GTGGTGCGTG AAGCGGTTCG CTTGGGTGTG CCGGTATCGG TCGATACCTA CAAGCCAAGG
GTCATGCAAG CCGTGCTGGA CCTTGGCGCT GACATCATCA ACGACATTTG GGCTCTGCGT
TGGACTGAGC CCTGTGCCAA CCCCGCACCC GCTGCCTTGA ACGCCATGCA AGTGGTGGCA
AAACACCCCA GTTGTGGCGT CTGTCTGATG CACATGCACC GTGAACCCTT GACGATGCAG
ATGGCCCCCA TGGAGGGGGA CGTGGTGCCG CAGGTGCTAT TATTTTTGGA GCATTTGGCC
CAATCGTTGC ATGGGCTAGG GGTAGAAAAG AATCGTATCG TTATTGACCC CGGCATTGGC
TTTGGCAAGA CCGTGGCACA GAATTTTGCG CTACTGGCAC GGCAGGGTGA GCTGCTGGGT
GCGGGTTATC CGCTGCTGGT CGGTTGGTCG CGAAAATCAT CATTGGCAGC GATCACAGCC
ACCCCGCTGG CCGCCGCGGC GACACTGGAT GTTCATGAGC GCCTGGTGCC CAGTGTGGCC
GCTGCGTTGT TGGCCGTGGA GCGTGGCGCA GCCATTGTCC GTGTGCATGA CGTGCGGGAA
ACCGTGCAGG CTCTCAAGGT GCTCGGCGCT ATAAGATAG
 
Protein sequence
MKWNTARFLI DLSRPQVMGI VNITPDSFSD GGQHASTAAA LRHCETLLKE GADILDIGGE 
STRPGALSLP LDEELARVLP VVREAVRLGV PVSVDTYKPR VMQAVLDLGA DIINDIWALR
WTEPCANPAP AALNAMQVVA KHPSCGVCLM HMHREPLTMQ MAPMEGDVVP QVLLFLEHLA
QSLHGLGVEK NRIVIDPGIG FGKTVAQNFA LLARQGELLG AGYPLLVGWS RKSSLAAITA
TPLAAAATLD VHERLVPSVA AALLAVERGA AIVRVHDVRE TVQALKVLGA IR