Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rfer_2011 |
Symbol | |
ID | 3961759 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodoferax ferrireducens T118 |
Kingdom | Bacteria |
Replicon accession | NC_007908 |
Strand | + |
Start bp | 2167362 |
End bp | 2169281 |
Gene Length | 1920 bp |
Protein Length | 639 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 637916831 |
Product | ATP-dependent metalloprotease FtsH |
Protein accession | YP_523267 |
Protein GI | 89900796 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0465] ATP-dependent Zn proteases |
TIGRFAM ID | [TIGR01241] ATP-dependent metalloprotease FtsH |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGAATAATC AGTGGTTTTC AAAAATTGCC GTCTGGCTCG TTATTGCTCT TGTGCTTTTC ACGGTATTCA AGCAGTTTGA TGCGCGTGGG CCTGCGAGCG CCGGGTATCT GGGCTACTCT GACTTTCTGG AGGAAGTTCG AAATAATCGC ATCAAGAGCG CTGTCATCCA GGAGGGGCAG GGCGGTACTG AAATTGTGGC TGTGACGACC GATGACCGCA GGGTCAGGAC CACCGCGACA TACCTGGACC GTGGTCTGGT GGGTGACTTG ATCGCCAATG ATGTCAAGTT TGATGTCAAA CCGCGCGAAG AAGGTTCTTT GCTCATGACG CTGCTGGTCA GTTGGGGGCC GATGCTCTTG TTGATCGGTG TCTGGGTTTA CTTTATGCGC CAGATGCAGG GCGGCGGCAA GGGTGGGGCC TTCAGTTTTG GTAAATCCAA GGCACGTCTG CTTGACGAAA ACACCAACTT GGTGACCTTC GCTGATGTTG CGGGTTGTGA CGAGGCCAAG GAAGAAGTCA AGGAAGTGGT TGACTTTCTG AAAGATCCGG CCAAATTCCA GAAGCTGGGT GGGCGCATTC CGCGCGGCCT GTTGCTGGTG GGCCCACCGG GCACTGGCAA GACGCTGCTG GCCAAAGGCA TTGCCGGTGA AGCCAAGGTT CCGTTCTTTT CGATTTCGGG TTCTGATTTT GTTGAAATGT TCGTCGGCGT CGGTGCTTCC CGGGTGCGCG ACATGTTTGA GAACGCCAAG AAAAATGCAC CTTGCATTAT CTTTATCGAC GAAATTGATG CTGTGGGTCG GCAACGTGGC GCCGGCTTGG GCGGTGGCAA TGACGAGCGT GAACAAACAC TGAACCAGAT GCTGGTGGAG ATGGATGGTT TTGAGACCAA TGTTGGCGTG ATCGTGGTGG CTGCCACCAA TCGCCCTGAC ATTCTTGACT CCGCGTTGCT GCGGCCGGGC CGCTTCGACC GGCAGGTGTA TGTCACTCTG CCCGATATTC GGGGCCGTGA GCAAATTCTC AATGTACACA TGCGCAAAGT GCCCTTGGGT CAGGATGTCA ATGCCGGGGT GATCGCACGC GGTACACCGG GCATGTCGGG TGCCGATCTC GCTAATTTGT GCAATGAGGC GGCCTTGATG GCGGCACGTC GCAATGCCCG CACGGTTGAG ATGGCGGACT TTGAAAAAGC CAAGGACAAA ATTCTGATGG GCCCGGAGCG CAAGAGCATG GTCATGCCCG AAAGCGAGCG CAAGAACACG GCTTATCACG AGTCGGGTCA CGCGTTGATC GGCAAGTTGT TGTCCAAGTG CGATCCGGTG CACAAAGTGA CCATCATTCC GCGTGGTCGT GCCTTGGGCG TCACCATGAG TTTGCCAGCG CAAGACCGCT ACAGCTACGA CAGCGAATAC ATGCTGCACC AGATCAGCAT GCTGTTTGGT GGTCGTATTG CTGAAGAAGT GTTCATGAAC CAGATGACCA CCGGTGCCAG CAACGATTTT GAGCGTGCTA CCCATATTGC GCGCGACATG GTGACGCGTT ATGGCATGAC CGATGCCCTG GGTCCGATGG TCTATGCCGA GAATGAGGGC GAGGTGTTTT TGGGTCGCTC GGTCACCAAG ACCACCACCA TGAGCGAAGA GACCATGCAG AAGGTTGACG CCGAGGTGCG CCGCATCATT GACCAGCAAT ACAGCCTGGC GCGCAAGCTC ATTGAAGACA ATCGCGACAA GATGCACGCC ATGGCCAAGG CCTTGCTGGA GTGGGAAACC ATTGACAGTG AACAGCTCGA CGACATCATG GCCGGTAAAG AGCCCCGTCC GCCGAAAGAC TGGACGCCAC GTATCCCGCC CGCTGGCAGT GACAGCAGCA GTGGTGGCAC GCCCGCCGTC AAAACGGATG TGGCGCCAAC GGCTGCCTGA
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Protein sequence | MNNQWFSKIA VWLVIALVLF TVFKQFDARG PASAGYLGYS DFLEEVRNNR IKSAVIQEGQ GGTEIVAVTT DDRRVRTTAT YLDRGLVGDL IANDVKFDVK PREEGSLLMT LLVSWGPMLL LIGVWVYFMR QMQGGGKGGA FSFGKSKARL LDENTNLVTF ADVAGCDEAK EEVKEVVDFL KDPAKFQKLG GRIPRGLLLV GPPGTGKTLL AKGIAGEAKV PFFSISGSDF VEMFVGVGAS RVRDMFENAK KNAPCIIFID EIDAVGRQRG AGLGGGNDER EQTLNQMLVE MDGFETNVGV IVVAATNRPD ILDSALLRPG RFDRQVYVTL PDIRGREQIL NVHMRKVPLG QDVNAGVIAR GTPGMSGADL ANLCNEAALM AARRNARTVE MADFEKAKDK ILMGPERKSM VMPESERKNT AYHESGHALI GKLLSKCDPV HKVTIIPRGR ALGVTMSLPA QDRYSYDSEY MLHQISMLFG GRIAEEVFMN QMTTGASNDF ERATHIARDM VTRYGMTDAL GPMVYAENEG EVFLGRSVTK TTTMSEETMQ KVDAEVRRII DQQYSLARKL IEDNRDKMHA MAKALLEWET IDSEQLDDIM AGKEPRPPKD WTPRIPPAGS DSSSGGTPAV KTDVAPTAA
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