Gene Rfer_1999 details

Gene Information

• Locus tag: Rfer_1999
• ID: 3962223
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Rhodoferax ferrireducens T118
• Kingdom: Bacteria
• Replicon accession: NC_007908
• Strand: +
• Start bp: 2155663
• End bp: 2156115
• Gene Length: 453 bp
• Protein Length: 150 aa
• Translation table: 11
• GC content: 54%
• IMG OID: 637916819
• Product: beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ
• Protein accession: YP_523255
• Protein GI: 89900784
• COG category: [I] Lipid transport and metabolism
• COG ID: [COG0764] 3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier protein) dehydratases
• TIGRFAM ID: [TIGR01750] beta-hydroxyacyl-[acyl carrier protein] dehydratase FabZ

Plasmid Coverage information

• Num covering plasmid clones: 9
• Plasmid unclonability p-value: 0.0235226
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

TTGAATAGAA ATACCATGGA CATTTATAAA ATTCTCAAGC AACTGCCACA CCGTTACCCC 
TTCCTGCTGG TGGATCGGGT GCTGGCGATT GACAAGGGTA AGAGCATCCG GGCGGTGAAA 
AATGTCACCA TCAATGAGCC TTTTTTTCAA GGCCATTTTC CCTATCGGCC GGTGATGCCG 
GGCGTGTTGA TGCTTGAAGC CCTGGCGCAG GCCGCCGCGC TGCTGGCGTT TGACGCGATC 
GATACGACGC CAGACGAGGA TTCTGTTTAC TATTTTGCCG GCATGGATGG CGTGCGCTTC 
AAGCGTCCGG TGGAGCCTGG CGATCAACTG ATTCTTGAAG TTGAGTTGGT GCGCATGAAG 
GCGGGCATTT TCAAGTTCAA GGCGCGCGCC CTGGTGGACA ATGAACTCGC AGTGGAAGCC 
GAGTTGACCT GCGCTGTGCG CAAAATAGCC TGA 

 

Protein sequence

MNRNTMDIYK ILKQLPHRYP FLLVDRVLAI DKGKSIRAVK NVTINEPFFQ GHFPYRPVMP 
GVLMLEALAQ AAALLAFDAI DTTPDEDSVY YFAGMDGVRF KRPVEPGDQL ILEVELVRMK 
AGIFKFKARA LVDNELAVEA ELTCAVRKIA