| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_1995 |
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| Symbol | |
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| ID | 3962219 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | + |
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| Start bp | 2150342 |
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| End bp | 2151703 |
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| Gene Length | 1362 bp |
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| Protein Length | 453 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637916815 |
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| Product | peptidase M50, putative membrane-associated zinc metallopeptidase |
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| Protein accession | YP_523251 |
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| Protein GI | 89900780 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0750] Predicted membrane-associated Zn-dependent proteases 1 |
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| TIGRFAM ID | [TIGR00054] RIP metalloprotease RseP |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTGACTC TTGCCGCCTT TGTACTTGCC CTTGGTGTTT TGATCGCCAT CCATGAGTAT
GGCCACTACC GGGTGGCCGT GGCTTGTGGT GTCAAAGTGC TGCGTTTTTC CATTGGATTT
GGCAAGACCT TGTATCAATG GCAGCGCAAG GGTTCATCGA CCGAATTTGC GCTGTGCGCT
TTTCCGCTGG GCGGCTACGT CAAGATGCTG GATGAGCGCG AGGCACCGGT GCCCGAGGGT
GAGCGGCATC TGGCATTCAA CAACCAGCCT TTGCGTTCGC GCGTCGCCAT TGTGGCGGCG
GGCCCGGTGG CCAATTTGCT GCTCGCGGTG TTGTTGTACG CGGTGGTGAA CTGGAGCGGC
GTGCAATATC CGGCAGCGAT ACTGGCCAGC CCCGAGGCGG GTTCGATTGC GCAGCAGGCC
GGATTGGCGG GCGGTGAGCG GGTCCAGCGT GCCGGCTTTG CCGACGACGA AATGAAGAGC
GTGGCGTCGT TTGAAGACCT GCGCTGGTTC TTGACCCGGG GGGCGCTGGA AGGGCAAGAC
GTGCGACTGG AGCTGACGGG GCCGGGACGT ACGACGACAA GCGACGTGCT GCTGAAGCTC
TCGGCCATGG ATGCCAGCGA GGCCAATGCG GACTTGTTTC GCAGAATCGG GGTCGTGGGC
CCGTACACCC GTCCTGTCAT TGGCGAGGTC ACCGTGGGCG CCGCGGCCGA CAAAGCTGGT
TTGCGCGATG GTGATGTGGT GCGCCAGGTC GGGTCGGTGC CGGTGGTGGA CGGCCAGCAA
TTGCGTCGGC TGATTCGCGC ATCGATCGTG AACGGCCGAA CCGTCCCAGC CACCTGGAAA
ATTGACCGGG CCGGAATCGA ACTTGAAATC ATCGTCACGC CCGAGACTCG ACAAGACGGA
GAGTTGTTGG TGGGGAGAAT CGGCGCCTAT GTTGGGGCCA TGCCGGAGCT GGTGACGGTG
CGCTATGGCG CTGTCGACGG TTTGTGGCGC GGCGTGACGC ATACTTGGGA TGTCTCTCTC
TTGACGCTCA GAATGATGGG CAAGATGTTG ATTGGCGAGG CTTCAGTCAA AAACCTCAGC
GGTCCTTTGA CAATTGCGGA CTACGCCGGC AAATCCGCTG CCATGGGACT GACGCAGTAC
TTGCTGTTCC TGGCCTTGAT CAGTGTCAGC TTGGGCGTTT TGAATTTGCT GCCGCTGCCG
GTTTTGGACG GTGGTCACCT GATGTATTAT CTTTGGGAAG GCGTGACGGG CAAACCGGTT
CCGGATGCCT GGATGGAGAC TTTGCAGCGG GGTGGCGTTG CCATCCTGTT TCTTCTGATG
TCGATTGCCC TCTTTAACGA CATCACCCGC TTATTTGGCT AA
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| Protein sequence | MLTLAAFVLA LGVLIAIHEY GHYRVAVACG VKVLRFSIGF GKTLYQWQRK GSSTEFALCA
FPLGGYVKML DEREAPVPEG ERHLAFNNQP LRSRVAIVAA GPVANLLLAV LLYAVVNWSG
VQYPAAILAS PEAGSIAQQA GLAGGERVQR AGFADDEMKS VASFEDLRWF LTRGALEGQD
VRLELTGPGR TTTSDVLLKL SAMDASEANA DLFRRIGVVG PYTRPVIGEV TVGAAADKAG
LRDGDVVRQV GSVPVVDGQQ LRRLIRASIV NGRTVPATWK IDRAGIELEI IVTPETRQDG
ELLVGRIGAY VGAMPELVTV RYGAVDGLWR GVTHTWDVSL LTLRMMGKML IGEASVKNLS
GPLTIADYAG KSAAMGLTQY LLFLALISVS LGVLNLLPLP VLDGGHLMYY LWEGVTGKPV
PDAWMETLQR GGVAILFLLM SIALFNDITR LFG
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