| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_1994 |
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| Symbol | |
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| ID | 3962218 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | + |
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| Start bp | 2149109 |
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| End bp | 2150323 |
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| Gene Length | 1215 bp |
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| Protein Length | 404 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637916814 |
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| Product | 1-deoxy-D-xylulose 5-phosphate reductoisomerase |
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| Protein accession | YP_523250 |
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| Protein GI | 89900779 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0743] 1-deoxy-D-xylulose 5-phosphate reductoisomerase |
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| TIGRFAM ID | [TIGR00243] 1-deoxy-D-xylulose 5-phosphate reductoisomerase |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATGATG TGAAAAACTT GCCCAAGCAG CGGGTTGCTA TTTTGGGCTC GACGGGATCC
ATTGGGGTCA GCACGCTCGA TGTGATTGCG CGCCATCCCG ATCGGTTCGA GGTCTTCGCC
CTGAGCGCTG CGACTCAGAC TCAATTGATG CTGGAACAGT GCGTGCGGTT CAAACCCGTG
TTTGCCGTTA TGGTCAGTGA GCCCCATGGA CGCGCGCTGG AGCGCCAATG CCGCGAACTT
CATTTGACGA CACGGGTTCT TTGGGGCGCA TCGGCTCTTG CCATGATTGC CTCGCATGAA
CTGGTGGACG CGGTTATGGC GGCGATCGTG GGGGCGGCCG GATTGGCCTC CTGTTTGGCG
GCAGCCCAGG CGGGCAAACG TTTGTTGCTG GCCAACAAGG AAGCTTTGGT GGTGGGTGGT
GCCTATTTCA TGCAGGCGGT GGCCAAAGGG GGCGCCAAGC TGCTGCCGAT TGACAGCGAG
CATTCGGCCA TTTTTCAGTC ATTACCCGAC GATGCTGCCG TCTGGTCGAG CCAGATCGAC
AAAATTATTC TCACCGCCTC AGGTGGGCCG TTCAGACAGC GCGAGCCCCA AACGCTGCGG
GACGTGACGC CGGACCAGGC CTGCGCCCAC CCCAATTGGG TCATGGGACG CAAGATATCG
GTCGACTCTG CCACCATGAT GAACAAGGCG CTGGAAGTCA TTGAGGCCAG ATTCCTGTTC
GGTGTCAATC CGGAGCAGAT TGAGGTGGTG ATTCACCCGC AGAGCGTCAT TCATTCAATG
GTGCAGTACA AAGACAATTC CGTCCTGGCC CAGCTCGGCA CGCCCGACAT GAAAGTGCCG
ATTGCCTATG GCCTGTGCTG GCCGGATCGC ATGGTCTCGG GTGCTGGTGC GCTGGATTTT
CGGGCGATGG CTGACCTGAC GTTCGAGTCG CTGGACTCGA ACGGCCATGA ACAACGTTTT
CCGGGTTTGC AGCTGGCGTG GGCAGTGTTG CGGGCGCCTT CCGGTTCGAC TGCCGTGTTG
AACGCCGCCA ATGAAGTGGC GGTCGCTGCG TTTCTTGACG GCCAAATACG GTTTGACCAG
ATTCATGGGG TTAATCTGGA AACACTTGAA TCGGTTGTCC CAGCCAGCCC GCAGTCGCTG
GAGGATCTGC TGGCGCTGGA CGCCGAGTCG CGTGCTGCCG CGCAGCAGGT GGTGCGCCGT
GTCGGCAATC AATAG
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| Protein sequence | MNDVKNLPKQ RVAILGSTGS IGVSTLDVIA RHPDRFEVFA LSAATQTQLM LEQCVRFKPV
FAVMVSEPHG RALERQCREL HLTTRVLWGA SALAMIASHE LVDAVMAAIV GAAGLASCLA
AAQAGKRLLL ANKEALVVGG AYFMQAVAKG GAKLLPIDSE HSAIFQSLPD DAAVWSSQID
KIILTASGGP FRQREPQTLR DVTPDQACAH PNWVMGRKIS VDSATMMNKA LEVIEARFLF
GVNPEQIEVV IHPQSVIHSM VQYKDNSVLA QLGTPDMKVP IAYGLCWPDR MVSGAGALDF
RAMADLTFES LDSNGHEQRF PGLQLAWAVL RAPSGSTAVL NAANEVAVAA FLDGQIRFDQ
IHGVNLETLE SVVPASPQSL EDLLALDAES RAAAQQVVRR VGNQ
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