Gene Rfer_1989 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRfer_1989 
SymbolrpsB 
ID3962213 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodoferax ferrireducens T118 
KingdomBacteria 
Replicon accessionNC_007908 
Strand
Start bp2144940 
End bp2145692 
Gene Length753 bp 
Protein Length250 aa 
Translation table11 
GC content55% 
IMG OID637916809 
Product30S ribosomal protein S2 
Protein accessionYP_523245 
Protein GI89900774 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0052] Ribosomal protein S2 
TIGRFAM ID[TIGR01011] ribosomal protein S2, bacterial type 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0218632 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAATTA CCATGCGCGA AATGCTGGAA GCCGGTGTCC ATTTTGGCCA CCAAACCCGC 
TTCTGGAACC CCAAAATGGC CCCGTTCATC TTCGGCCATC GCAACAAGAT TCACATCATC
AACCTGGAAA AATCGTTGCC GATGTTCCAG GAGGCCGCCA AGTTTGCGAG CCAGGTTTCC
GCCCGGCGCG GCACCGTGCT GATGGTGGGT ACCAAACGCC AGGCACGTGA GACCGTCGCC
CTGGAAGCCC AGCGTGCCGG CGTGCCTTAT GTTGACCAGC GTTGGCTCGG CGGCATGTTG
ACCAACTTCA AGACGGTCAA GACCTCCATC AAACGCCTCA AAGACATGAA GATCCAGCAA
GAAGCGGGTC TGGACAGCTT GAGCAAGAAA GAGCAGCTCA TGTTCGCCCG TGAGCTGGCC
AAGCTCGAAC GCGACATTGG CGGCATTCAG GATATGACGG TGCTGCCGGA TGCGATTTTC
GTGATTGACG TCGGTTTCCA CAAAATTGCG ATTGCCGAAG CCAAAAAGCT CGGCATTCCC
CTGATTGCCG TGGTCGACAC CAATCACTCG CCTGAAGGAA TTGATTACAT CATTCCTGGC
AATGATGACT CATCCAAGGC GGTTATTTTG TATGCTCGCG GCATTGCCGA TGCGATCATT
GAAGGTCGTT CCAATGCGGT GGACGATGTG GTCAAGGCCG TCGTCGCTGA GAGCTCTGAC
GAATTTGTTG AAGTGAATGA AACAGCAGCC TGA
 
Protein sequence
MAITMREMLE AGVHFGHQTR FWNPKMAPFI FGHRNKIHII NLEKSLPMFQ EAAKFASQVS 
ARRGTVLMVG TKRQARETVA LEAQRAGVPY VDQRWLGGML TNFKTVKTSI KRLKDMKIQQ
EAGLDSLSKK EQLMFARELA KLERDIGGIQ DMTVLPDAIF VIDVGFHKIA IAEAKKLGIP
LIAVVDTNHS PEGIDYIIPG NDDSSKAVIL YARGIADAII EGRSNAVDDV VKAVVAESSD
EFVEVNETAA