| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_1988 |
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| Symbol | |
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| ID | 3964344 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | - |
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| Start bp | 2143437 |
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| End bp | 2144846 |
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| Gene Length | 1410 bp |
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| Protein Length | 469 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637916808 |
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| Product | amidase |
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| Protein accession | YP_523244 |
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| Protein GI | 89900773 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0154] Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.616818 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAACTGG TTTGCTGTTT TGCTCACCAA ATAGCCACTT GGGCCACCCA GCAAAGCCTG
ACAATTATAG CCTGCGATTC CATGCTTTCA GACCTCCACA CCACCCGGCA GCGCTTGCGC
ACTGGCCAAA CCCAGGCAAC AAGCGAAATT GAGCGGGCCA TTCAGGCCGC GCAATCACCT
GCCTGCCAGC ATGCCTTCGT GCAGACCACA TTTGACGAGG CCCGCGCCAT CGCCAACACC
CCGGGCATCC AGACCAAGCC GCTGGCGGGC CTGGCCGTTT CCATCAAGGA CCTGTTTGAT
GTGGCCGGAC AAACCACCTG CGCCGGCTCG GTGGTCCTCA AGGACAACCC GCCCGCCGAG
CAAGACAGCC CGGCCGTTGC GCGTTTGCGC CGCGCTGGCG CCGCCTTCAT GGGGCGCACC
CATATGGTGG AATTTGCATT CTCGGGCGTC GGCACCAATC CACACTTTGG TACACCGGTC
AACCCGTGCA GCACCGATGT GCCACGCATT CCCGGTGGCT CCTCGTCGGG CGCTGGCGTA
TCAGTCGCTA CCGGCGCCGC CTTCATCGGT CTGGGAAGCG ACACCGGCGG CTCCATCCGC
ATCCCGGCCG CTCTGAACGG CATTGTTGGC TTTAAAAGCA CCGCCCGCCT GGTGCCGACC
CAAGGTGCTC TGCCACTGTC CACCACACTT GACACGGTCT GCGCCATGAC CCGCAGCGTG
CGTGACGCGA TGCTGGCGCA CGAGCTGCTG GCCCAGCGCC AGGTGACGCG CAGCTCCGCG
CCACTGGCCG CCTACCGCCT GGCCGTTGCC CGCACCCTGA TGCAGGACGA GCTGGACGAC
ACCGTTTCAC GCGCCTGGCA GCGCACCCTG GCCACCCTGC GCCGGGCCGG AGCCCAGGTT
GAAGAAGTCA ACCTGACCGA GATCGGCCAG CTGCAGTCGA TTCAGGCCGC TGGCAGCTTG
GCGGCGGCCG AGAGTTACGT TTGGCATCGC CAGTTACTTG AGCGCAACGC CGCTGCTTAC
GACCCACGCG TGGCAAGCCG CATCCAGCGC GGCGCCAGCA TGAGTGCCTA TGACTACATC
ACGCTGCTGC GCGAGCGGCA ACGCTGGATC AGCCAGATGG CATCGGCCCT GCAGGGCTTT
GACGCGGTGT TGTCGCCCAC CGTCCCGATC GTGGCACCAC CCATGGCGGA GCTGGCACCA
GGCCTCGCGC GCGACGCTGC TTTCTTGCGC GTCAACGCCC TGCTGCTGCG CAACCCCAGC
GTGGTCAACA TGCTCGATGG CTGCGCGCTG TCGCTGCCGT GCCAGACCGC CGATGAGTTA
CCCGTGGGTT TGATGGTCTG GGCCGGTGCG TTGCGCGACG ACACCGTGCT CAATATCGCG
CTGCAGATCG AGCGAATACT ACAAAAATAA
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| Protein sequence | MKLVCCFAHQ IATWATQQSL TIIACDSMLS DLHTTRQRLR TGQTQATSEI ERAIQAAQSP
ACQHAFVQTT FDEARAIANT PGIQTKPLAG LAVSIKDLFD VAGQTTCAGS VVLKDNPPAE
QDSPAVARLR RAGAAFMGRT HMVEFAFSGV GTNPHFGTPV NPCSTDVPRI PGGSSSGAGV
SVATGAAFIG LGSDTGGSIR IPAALNGIVG FKSTARLVPT QGALPLSTTL DTVCAMTRSV
RDAMLAHELL AQRQVTRSSA PLAAYRLAVA RTLMQDELDD TVSRAWQRTL ATLRRAGAQV
EEVNLTEIGQ LQSIQAAGSL AAAESYVWHR QLLERNAAAY DPRVASRIQR GASMSAYDYI
TLLRERQRWI SQMASALQGF DAVLSPTVPI VAPPMAELAP GLARDAAFLR VNALLLRNPS
VVNMLDGCAL SLPCQTADEL PVGLMVWAGA LRDDTVLNIA LQIERILQK
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