| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_1986 |
|---|
| Symbol | |
|---|
| ID | 3964342 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodoferax ferrireducens T118 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007908 |
|---|
| Strand | - |
|---|
| Start bp | 2141192 |
|---|
| End bp | 2142034 |
|---|
| Gene Length | 843 bp |
|---|
| Protein Length | 280 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 637916806 |
|---|
| Product | metal dependent phosphohydrolase |
|---|
| Protein accession | YP_523242 |
|---|
| Protein GI | 89900771 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG1639] Predicted signal transduction protein |
|---|
| TIGRFAM ID | [TIGR00277] uncharacterized domain HDIG |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.0536621 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCCCTG AACTCTCTTT AAAACTCGCC GCCGCCGTGG ACGGCATGCC TGCGTTTCCC
AAAAGCGTGC AAAAGATCCT GGAACTCACG CGCGACGTCA ACTGCTCGCC CAAGGATCTG
GTGCAAGTCA TTGACAAGGA TCCGGTGGTC ACGGTCAAGG TGCTGCGCGT GGTCAACTCG
GCTTACTACA GCCTGCCCAA GCAGATCACC TCCATCAACC ATGCGGTGGT TTACTTGGGC
TTTAACACCA TCAAAAACCT GGCCTTGAGC ATCGCCGCCA TCGGCATGCT GCCGGCCAGC
AATGCGGCCG GTTTTGACGG CGCGCAGTAC CTGATTCACT CGCTGTCCAC GGCGGCCATC
GCCAAGCAGC TGGCCTTGCG TCTGGATGAT GCCGACCCGA TGGACTGTTT TATTGCCGGC
CTGCTGCACG ATTTTGGCAA GGTGGTGTTC GCGCAGTTCA TGCCGACCGA ATTTCGCAAG
GCCCTGGAAA CCAGCCAATG GAACGAGAGC TCACTGCACC TGGCGCTGCG AGACGTGATC
GGTGCTGATC ACGCGGTCGT CGGTGCGATG CTGGTCGAAA AATGGCGTTT CCCGGCCGAC
CTGGTGGAAA CCATTCGCTA CCAGTACGGC CCGGAAATCA AAGACACACC GATGATCGCC
TGTGTCTTTG CCGCCAACCA GATCAGCAAG AAGCTCGAAT TCGGCTTTGC CGGCAACCCC
TACATCGAAC AACTGCCACC CGCTATTGCG CAGCGGCTGG GTGGCACCTT GGACGAACTG
ATTGTCTCTT TGGGCGACCT GGCACCCCTG CTGGAAGAAG CCAAAATATT TTCAAAAGTT
TGA
|
|---|
| Protein sequence | MSPELSLKLA AAVDGMPAFP KSVQKILELT RDVNCSPKDL VQVIDKDPVV TVKVLRVVNS
AYYSLPKQIT SINHAVVYLG FNTIKNLALS IAAIGMLPAS NAAGFDGAQY LIHSLSTAAI
AKQLALRLDD ADPMDCFIAG LLHDFGKVVF AQFMPTEFRK ALETSQWNES SLHLALRDVI
GADHAVVGAM LVEKWRFPAD LVETIRYQYG PEIKDTPMIA CVFAANQISK KLEFGFAGNP
YIEQLPPAIA QRLGGTLDEL IVSLGDLAPL LEEAKIFSKV
|
|---|
| |