| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_1984 |
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| Symbol | |
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| ID | 3964340 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | - |
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| Start bp | 2138826 |
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| End bp | 2140289 |
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| Gene Length | 1464 bp |
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| Protein Length | 487 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637916804 |
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| Product | hypothetical protein |
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| Protein accession | YP_523240 |
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| Protein GI | 89900769 |
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| COG category | [G] Carbohydrate transport and metabolism
[S] Function unknown |
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| COG ID | [COG0062] Uncharacterized conserved protein
[COG0063] Predicted sugar kinase |
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| TIGRFAM ID | [TIGR00196] yjeF C-terminal region, hydroxyethylthiazole kinase-related
[TIGR00197] yjeF N-terminal region |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCAAAAAA TAGACTTCCG AACCCGCCAC GCCTTGTTCA ACGTGGCGGC CACACGCGCC
ATGGAGCAGG CGGCACAGGC CGCCCTGCCC GCTCACACCC TGATGGCGCG CGCCGGGCTG
GCCGTGGCGC AACTGGCGCT CGCCCTGGCG CCGCACGCCC GGCGCATCTG GATCGCCTGC
GGGCCCGGCA ACAACGGCGG CGACGGGCTG GAGGCCGCCA TGCACTTGCA GCGCTGGGGC
AAGCAGCCGG TGCTCACCTG GCTCGGCAGC GCAGACACGG CGCCAGCAGA TGCCGCGGCT
TCTTACCAGC GTGCGCTGCA GGCCGGCGTC ACCTTCTCGC AGACGCCGCC CGACGCGTTT
GATTTGTGCA TTGATGCCTT GCTGGGCATC GGCAGCCAGG TACGCGAGCC CGACGGTCGC
ATGGCCGACT GGATCAGGTT GATCAACGCC AGCAAGCAGG CGGTGCTGGC GGTGGACTTG
CCCACCGGCC TGCACGCCGA CACCGGCGCC GTGACGCAAC TGAGCGTCAA GGCCACGCAC
ACCTTGAGCC TGCTCACACT CAAACCCGGC TTGTTCACCG CGCATGGGCG CGACGCCGCT
GGCAGCGTCT GGCTGGCTGA CCTCGGCGTG GATCAACTCA CCGCCCTGGC GCAACAACCG
CTTGCACCAA CGGCCTGGCT GGCAGGCGCG CCGCCGGCGG CCGAGCGCCC GCATGCCTCG
CACAAAGGCA GCTACGGCGA TATCGCCGTG GTGGGCGGCG CACCCGGCAT GACCGGTGCC
GCCCTGCTGG CAGCGTCGGC CGCGCTGCAC GCGGGCGCCG GGCGGGTTTT TGTCGGCTTG
CTCGACGGTG GCACGCTGAG CGTGGATACC AGCCAACCCG AGCTGATGTT CCGACCGGTC
GAGGCACTTG AGCTGTCCGC CATGACGGTT GTTTGCGGCT GTGGTGGCGG GGACGCCATT
TGTGCGCAGC TGCCCAGGAT TTTATCGGCT GCAGCCGCCG TCGTTATTGA TGCAGATGCT
ATAAATGTAA TAGCAAATGA CACCAAGCTT CAAACCTTGC TGACCGAGCG CAGCCAGCGT
GGTGCCGCCA CCGTGCTGAC ACCGCACCCA CTGGAAGCCG CGCGCCTGCT GGGCACCAGC
GCCGCACAGG TCCAGGCGGA TCGCCTAGCC GCTTGCGGGC AACTGGCCGA GCGCTATCAC
TGCACCGTGG TGCTCAAAGG TTCGGGCACG CTGATGGCTG CCCCCGGCCA GACCTCCGTC
ATCAATCCCA CCGGCAACGC CCGCCTGGCC ACCGCAGGTA CGGGCGATGT ATTGGCGGGG
CTGATTGGCG CGCGCCTGGC GGGCGGCCTG GACGCTTTTG AGGCCGCTTG CCAGGCGGTC
TACCAGCACG GTCTGGCGGC CGATCGGTGG CCCCCCGGGC GCGCCTTGAC GGCTGGAGCC
TTGTCTCGTC TACTATTACA TTAA
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| Protein sequence | MQKIDFRTRH ALFNVAATRA MEQAAQAALP AHTLMARAGL AVAQLALALA PHARRIWIAC
GPGNNGGDGL EAAMHLQRWG KQPVLTWLGS ADTAPADAAA SYQRALQAGV TFSQTPPDAF
DLCIDALLGI GSQVREPDGR MADWIRLINA SKQAVLAVDL PTGLHADTGA VTQLSVKATH
TLSLLTLKPG LFTAHGRDAA GSVWLADLGV DQLTALAQQP LAPTAWLAGA PPAAERPHAS
HKGSYGDIAV VGGAPGMTGA ALLAASAALH AGAGRVFVGL LDGGTLSVDT SQPELMFRPV
EALELSAMTV VCGCGGGDAI CAQLPRILSA AAAVVIDADA INVIANDTKL QTLLTERSQR
GAATVLTPHP LEAARLLGTS AAQVQADRLA ACGQLAERYH CTVVLKGSGT LMAAPGQTSV
INPTGNARLA TAGTGDVLAG LIGARLAGGL DAFEAACQAV YQHGLAADRW PPGRALTAGA
LSRLLLH
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