| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_1968 |
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| Symbol | |
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| ID | 3963084 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | - |
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| Start bp | 2113675 |
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| End bp | 2114814 |
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| Gene Length | 1140 bp |
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| Protein Length | 379 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637916787 |
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| Product | chaperone protein DnaJ |
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| Protein accession | YP_523224 |
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| Protein GI | 89900753 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0484] DnaJ-class molecular chaperone with C-terminal Zn finger domain |
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| TIGRFAM ID | [TIGR02349] chaperone protein DnaJ |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.00646622 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCTAAAA GAGACTACTA CGAAGTCCTG GGCGTTCCCA AGAACGCATC GGACGAAGAA
ATCAAAAAGG CTTATCGCAA ACATGCGATG AAGCATCACC CGGACCGCAA TCAGGGCGAC
GCCTCCAAGG CGGCTGAGGA AAAATTCAAG GAGTCCAAGG AAGCCTACGA AATGCTGTCG
GACCCGCAAA AGCGTGCGGC CTACGACCAG CACGGTCATG CCGGTGTTGA TCCCAATATG
CGCGGCGGAC CCGGTGCGGA AGGTTATGGC GGGTTCGCCG AAGCCTTTGG CGATATTTTT
GGCGACATGT TTGGCCAGCA GCGCGGTCGG GCCGGTGCGG GGGGTGGACG CCAGGTTTTC
CGTGGCAGCG ATCTGAGCTA TGCGATGGAG GTGACGCTGG AAGAGGCGGC TCGGGGCAAG
GATGCCCAGA TCCGGATTCC GAGCTGGGAC GCGTGCGACG TGTGCCATGG CAGCGGTGCC
AAACCCGGCA CCCAGGCCAA GACCTGCGGC ACCTGCAGCG GCTCGGGCGC CGTGCAAATG
CGCCAGGGCT TTTTCAGCGT GCAGCAAACC TGCCCGACCT GCCGCGGCAC TGGCAAAGTC
ATTCCCGAGC CCTGCACGGC CTGTCATGGG CAGGGCAAGA TCAAAAAGCA GAAAACGCTG
GAAGTCAAGA TTCCAGCCGG TATCGACGGT GGCATGCGCA TTCGCAGCGC CGGCAACGGG
GAGCCTGGCA CCAACGGCGG CCCGGCCGGT GACCTGTACA TCGAAATCCG CCTCAAGAAA
CACGACATTT TTGAGCGTGA CGGCGATGAC ATCCATTGCT CGGTGCCGAT CAGCATCATC
ACGGCTTCGC TGGGTGGTGA AATTGATGTA CCAACACTGA GCGGCAAGGC CGCCATTGAT
ATCCCCGAAG GAACCCAAAC CGGCAAGCAA TTCCGGCTGC GCGGCAAAGG TATCAAGGGC
GTGCGCGCCA GCTATCCCGG TGATCTGTAT TGCCACATTC TGGTGGAGAC ACCGGTCAAG
TTGAGCGAAC ACCAGCGCAA GCTGCTGCGC GAGCTTGACG AGTCGCTGAA AAAAGGGGGC
AGCAAACATT CGCCCAGCGG CGACAGCTGG ACCGACCGGC TGAAAAGTTT TTTCAGTTGA
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| Protein sequence | MAKRDYYEVL GVPKNASDEE IKKAYRKHAM KHHPDRNQGD ASKAAEEKFK ESKEAYEMLS
DPQKRAAYDQ HGHAGVDPNM RGGPGAEGYG GFAEAFGDIF GDMFGQQRGR AGAGGGRQVF
RGSDLSYAME VTLEEAARGK DAQIRIPSWD ACDVCHGSGA KPGTQAKTCG TCSGSGAVQM
RQGFFSVQQT CPTCRGTGKV IPEPCTACHG QGKIKKQKTL EVKIPAGIDG GMRIRSAGNG
EPGTNGGPAG DLYIEIRLKK HDIFERDGDD IHCSVPISII TASLGGEIDV PTLSGKAAID
IPEGTQTGKQ FRLRGKGIKG VRASYPGDLY CHILVETPVK LSEHQRKLLR ELDESLKKGG
SKHSPSGDSW TDRLKSFFS
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