Gene Rfer_1965 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRfer_1965 
Symbol 
ID3963081 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodoferax ferrireducens T118 
KingdomBacteria 
Replicon accessionNC_007908 
Strand
Start bp2110235 
End bp2111494 
Gene Length1260 bp 
Protein Length419 aa 
Translation table11 
GC content62% 
IMG OID637916784 
Productiron-containing alcohol dehydrogenase 
Protein accessionYP_523221 
Protein GI89900750 
COG category[C] Energy production and conversion 
COG ID[COG1454] Alcohol dehydrogenase, class IV 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.549318 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTGACCA TGAATCTGAT CGCGGACGTG GGGCGCTCGG TGGGGCTTTC GGCCGTCATG 
CGGGCGGCGG GTCTGGTGAC GCGACTGATG CCCATACCGC AGCCCACCCT GCTGGTGGGA
CCCGGCTCAA GTGCGCGGCT GGGACAAGCT GTCTGCGGCT TTGGTCACCG CAAGGTCCTG
ATCGTCACCG ACCCCATCGT CTCCGGTCTG GGCTTGCTGA ATCGATTGAC CCAGGCCTTG
ACCGAAGGCG GAACGGCCTT TGTGGTGTTT GATGAAATCA CCCAGGACGC GCCCATCCCG
CTGATCGAGA AAGGAATTGC GGTTTTCAAG ACCGAGGGCT GTGACGCCAT CGTGGCCTTT
GGCGGTGGCT CGGCGATGGA TGCCGCCAAG GCTATTGGGC TGTCGGCGGC CAACCACAAG
TCGCCGCGCA GCCTGGCGGG GTATTTCCGG GGCTTGCACG CACCCGTTCC CATCTATGCC
GTGCCAACCA CCGCCGGCAC CGGTTCTGAA GTGACCGTGG CCGCTGTCAT TTCCGACCCT
GAAAACAAGA TGAAATTGGT GATTGCGGAT ACCCGCATTG TGCCAAAGAT GGCGGCCCTG
GACCCCGTCT TGATGACCGG GCTGCCGCGC CATGTCACTG CCGCCACCGG CATGGATGCG
CTGACCCATG CAATTGAAGC TTTCATCGGC CACTGGTCCA CCGACGACTC CGATCGCATG
GCGCTGGCCG CGGTGCGCCT GATTTATCAC AATTTGCGTG CGGTCTACAA GGACGGCAAC
AACCTCGAGG CGCGCGAACA AATGGCGCTG GCGGCGACCT ATGCCGGCCT GGCATTCACC
CGGGCCAATG TAGGCAATGT CCACGCCATT GCCCACCAAC TGGGCGGCAA ATACCACACG
CCGCATGGTC TCGCCAATGC CATCATGTTG CCGCATGTCC TGCGGTTTTA CGGCCCTGCC
GTCAATGACA GATTGGCGGT TCTGGCGCTG CACGCCGAAG TGGGGACCCA GGGGGAGCCA
GAGGACGTGC TGGCGCAGGA GTTTCTGGCG TCGATCGACG CGTTAAGCCG CGACCTTGGC
ATTCCGCGCC AACTGAACGC GCTGCGCAAA GCGGACATTC CCGCCTTGGC GAGAGCTGCC
TGCCGTGAAG CGGATACCAA TTACCCGGTG CCACGCTATA TGTCGGTCGA AAGCTGTGCG
GCCTTGATTC GCGCCGTGTT GCCAAAACCC GCCGCACGCA AAAAACTCAA GGCGCTGTGA
 
Protein sequence
MLTMNLIADV GRSVGLSAVM RAAGLVTRLM PIPQPTLLVG PGSSARLGQA VCGFGHRKVL 
IVTDPIVSGL GLLNRLTQAL TEGGTAFVVF DEITQDAPIP LIEKGIAVFK TEGCDAIVAF
GGGSAMDAAK AIGLSAANHK SPRSLAGYFR GLHAPVPIYA VPTTAGTGSE VTVAAVISDP
ENKMKLVIAD TRIVPKMAAL DPVLMTGLPR HVTAATGMDA LTHAIEAFIG HWSTDDSDRM
ALAAVRLIYH NLRAVYKDGN NLEAREQMAL AATYAGLAFT RANVGNVHAI AHQLGGKYHT
PHGLANAIML PHVLRFYGPA VNDRLAVLAL HAEVGTQGEP EDVLAQEFLA SIDALSRDLG
IPRQLNALRK ADIPALARAA CREADTNYPV PRYMSVESCA ALIRAVLPKP AARKKLKAL