Gene Rfer_1963 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRfer_1963 
Symbol 
ID3963079 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodoferax ferrireducens T118 
KingdomBacteria 
Replicon accessionNC_007908 
Strand
Start bp2107038 
End bp2107739 
Gene Length702 bp 
Protein Length233 aa 
Translation table11 
GC content68% 
IMG OID637916782 
Producthypothetical protein 
Protein accessionYP_523219 
Protein GI89900748 
COG category[S] Function unknown 
COG ID[COG1814] Uncharacterized membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGCTAT TTCACCGCCA CACGGAACGT CACCGCACTG ACCGGATAGG CTGGCTGCGC 
GCGGCCGTAC TTGGCGCCAA CGACGGTATC GTTTCAACCG CCAGTCTGGT GGTCGGTGTT
GCGGCTGCCA GTGCGAGCCA TGGCAGCATT TTGCTGACCG GTGTCGCGGG GCTGGTGGCG
GGCGCCATGT CGATGGCCGC GGGTGAGTAT GTCTCGGTCC ACTCACAGGC AGACACCGAA
ACAGCTGACC TTTCGCGTGA GCGCGCCGAG CTCGAACTGG ACCCGGCCTC AGAACGGCGT
GAACTGGCAG CCATTTATGT CGCGCGGGGG CTGCAGCCCG GCCTGGCGCA GCAGGTGGCC
GAGCAACTGA TGCAGCACGA CGCCCTGGGC GCCCATGCGC GCGACGAGCT CGGCATCTCC
GATACTTTTA GCGCCCGGCC GGTTCAGGCC GCGCTGGCGT CGGCCGCCAG CTTCGCGGTC
GGTTCGGTGC TGCCGCTGGC CGCCACGGCG TTGGCGCCCG AGACCGGCTT GATTGGCTGG
GTGTCCGGAA CGTCCCTGCT CTTCCTGGCC TTGTTGGGCG CCGTCGCCGC CCGGGTTGGC
GGCGCCGGTG TTCTGGTTGG CGCCTGGCGG GTCACGTTCT GGGGTGCGCT CGCGATGGGG
ATCACGGCAG GGGTGGGCGC ACTTTTCGGT GCGGTCGTTT GA
 
Protein sequence
MKLFHRHTER HRTDRIGWLR AAVLGANDGI VSTASLVVGV AAASASHGSI LLTGVAGLVA 
GAMSMAAGEY VSVHSQADTE TADLSRERAE LELDPASERR ELAAIYVARG LQPGLAQQVA
EQLMQHDALG AHARDELGIS DTFSARPVQA ALASAASFAV GSVLPLAATA LAPETGLIGW
VSGTSLLFLA LLGAVAARVG GAGVLVGAWR VTFWGALAMG ITAGVGALFG AVV