| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_1961 |
|---|
| Symbol | |
|---|
| ID | 3963077 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodoferax ferrireducens T118 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007908 |
|---|
| Strand | - |
|---|
| Start bp | 2105436 |
|---|
| End bp | 2106395 |
|---|
| Gene Length | 960 bp |
|---|
| Protein Length | 319 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 637916780 |
|---|
| Product | rhodanese-like protein |
|---|
| Protein accession | YP_523217 |
|---|
| Protein GI | 89900746 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1054] Predicted sulfurtransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACTGAAT TCCTGACCGC CGCCTTCTAC AAGTTCGTCG AACTGCCCGA TTTCGCGCAG
CTCAAAGCAC CGCTGCTCAC CTGCTGCGAA GCCAACGACG TCAAAGGCAC CATTTTGCTG
GCGACTGAGG GCATCAACAG CACGATTGCC GGACCGGCGG TCGGCGTACA CGCCGTGCTG
GCCTATCTCA GGCGTGATCC GCGCCTGGCA GACCTGCAAC ATAAGGAAGC CTGGTCGGCC
AAAGCACCGT TTTACCGGAT GAAGGTGCGC CTCAAGCGCG AGATCGTCAC CATGGGCGTG
CCGGGCATCG ACCCGAACCT TGTGGTTGGC ACCTATGTCA AACCGCAAGA CTGGAACGCA
TTGATTGGCG ACCCCGATGT GGTGGTGATC GATACACGCA ACGACTACGA AGTCGGCATC
GGCACGTTTG CGGGTGCCGT CAACCCGGAC ATCCAGAGTT TTGCCATGCT GCCGCAATGG
CTGGCACAAG CGCCCGCCTT GCACCCGGCC ACCGGCAAGA AACCCAAAGT GGCCATGTTT
TGCACCGGCG GCATCCGCTG CGAAAAGTCC ACTGCCCTGT TGCGGGCGCA AGGCTTTGAC
GAGGTCTTCC ACCTGGAAGG CGGCATCCTG AAATACCTGG AGACGATTCC CCCTGAGCAA
AGCCTTTGGC AGGGCCAGTG TTTTGTGTTC GATGAACGGG TGTCGGTTGG CCACGGCCTG
ATACCTGGGC AGCACGATCT TTGCCGCGCC TGCCGGCAGC CTCTGGATGA TGCTGACCTC
GCATCACCGC TGTTTGAAGC GGGGGTGAGC TGCCCCAAAT GCCATGCCAT CACCCGCGAC
ATTCAGAAAG ACGGCGCCCG CGAACGCCAG CGCCAATGGG AGCTGGCCAA GGCACGTCAG
CAAGTGCATA TCGGCGCGAG CCCGGAACCG AAAGCCATGC CAGCTACGGC AGGCCGCTGA
|
|---|
| Protein sequence | MTEFLTAAFY KFVELPDFAQ LKAPLLTCCE ANDVKGTILL ATEGINSTIA GPAVGVHAVL
AYLRRDPRLA DLQHKEAWSA KAPFYRMKVR LKREIVTMGV PGIDPNLVVG TYVKPQDWNA
LIGDPDVVVI DTRNDYEVGI GTFAGAVNPD IQSFAMLPQW LAQAPALHPA TGKKPKVAMF
CTGGIRCEKS TALLRAQGFD EVFHLEGGIL KYLETIPPEQ SLWQGQCFVF DERVSVGHGL
IPGQHDLCRA CRQPLDDADL ASPLFEAGVS CPKCHAITRD IQKDGARERQ RQWELAKARQ
QVHIGASPEP KAMPATAGR
|
|---|
| |