| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_1960 |
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| Symbol | |
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| ID | 3963076 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | + |
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| Start bp | 2104415 |
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| End bp | 2105380 |
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| Gene Length | 966 bp |
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| Protein Length | 321 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637916779 |
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| Product | 2-nitropropane dioxygenase, NPD |
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| Protein accession | YP_523216 |
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| Protein GI | 89900745 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2070] Dioxygenases related to 2-nitropropane dioxygenase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCCCACT TGCCCGCGCC CCTGAACCGC TTGCCGTTCC CCGTGATCGG CTCGCCCTTG
TTCATCATCA GCAACCCCAA GCTGGTGATT GCCCAGTGCA TCGCCGGTGT GGTCGGTGCC
ATGCCGGCGC TCAATGCGCG CCCGGCCGAG CAGTTGGAAG AATGGCTGAT AGAAATCACC
GAAGCGCTCT CTGCCCACAA CCTGGCCCAC CCGGAGCAGC CCGCCGCACC CTTTGCCATC
AACCAGATCG TGCACAAGAG CAATGACCGC CTGGAGCATG ACATGGCACT TTGCGTCAAG
TACAAGGTGC CGATCATCAT CACGTCCTTG GGCGCGCGCG AAGACATCAA TGCGGCTGCC
CACTCCTACG GCGGTGTGGT GCTGCATGAC GTCATCAACA ACAAGCATGC GCACAAGGCA
ATCGAGAAGG GCGCGGACGG TTTGATTGCA GTGGCGGCCG GTGCCGGTGG ACATGCCGGT
TTGAAGAGCC CGTTTGCGCT GATTCAGGAA ATCCGCCAGT GGTTTGACGG CCCGCTGGTC
TTGAGCGGCG CCATTGCCAC CGGCGACGCC GTGCTGGCCG CGCAGGCCAT GGGCGCGGAC
TTTGCCTATA TCGGTTCCGC CTTCATCTCC ACCGAAGAGG CACGGGCCGC ACAAGAGTAC
AAGCAGGCCA TTGTCGACAG CAACTCGGAC GATATCGTCT ACAGCAACCT GTTCACCGGT
GTCCATGGCA ACTACCTGGC GCCCAGTATC CGCGCCGCTG GCCTGGACCC CGAGCACCTG
CCGGAAAGCG ACCCCAGCAA GATGAATTTT GGCGGCGACA AGTCCAGAGC CTGGAAAGAC
ATCTGGGGTT GCGGCCAGGG CATTGGCGCT GTCACCAAGG TTCAGCGTAC CGCCGATTTT
GTGGCCCAGC TCAAGCGCGA GTACGCCAGT GCGCGGGCGC GACTGCTGGC AAAAAACTAT
GCCTGA
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| Protein sequence | MSHLPAPLNR LPFPVIGSPL FIISNPKLVI AQCIAGVVGA MPALNARPAE QLEEWLIEIT
EALSAHNLAH PEQPAAPFAI NQIVHKSNDR LEHDMALCVK YKVPIIITSL GAREDINAAA
HSYGGVVLHD VINNKHAHKA IEKGADGLIA VAAGAGGHAG LKSPFALIQE IRQWFDGPLV
LSGAIATGDA VLAAQAMGAD FAYIGSAFIS TEEARAAQEY KQAIVDSNSD DIVYSNLFTG
VHGNYLAPSI RAAGLDPEHL PESDPSKMNF GGDKSRAWKD IWGCGQGIGA VTKVQRTADF
VAQLKREYAS ARARLLAKNY A
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