Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rfer_1953 |
Symbol | |
ID | 3963069 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodoferax ferrireducens T118 |
Kingdom | Bacteria |
Replicon accession | NC_007908 |
Strand | - |
Start bp | 2097181 |
End bp | 2098185 |
Gene Length | 1005 bp |
Protein Length | 334 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 637916772 |
Product | binding-protein-dependent transport systems inner membrane component |
Protein accession | YP_523209 |
Protein GI | 89900738 |
COG category | [E] Amino acid transport and metabolism [P] Inorganic ion transport and metabolism |
COG ID | [COG0601] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.186843 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTGCGTT TTCTCTTAAC CCGCTTCAGC CTGATCATCC CGACCTTCAT CGGCATGACG CTGTTGGCGT TCTTCCTGAT TCGCCTGGTA CCGGGGGATC CGATTGAGAC CCTGGCGGGC GAACGCGGCA TCGATGCCGT GCGCCACGCC ACCCTGCTCA AGGAGTACGG ACTGGACCGC CCGGTGCTGG TGCAATACGG CATTTACATC GGCCGTGTGC TGCAAGGCGA TCTGGGCAAA TCGATCATCA CCCACGAACC CGTGCTGCGT GAGTTCATGA CACTGTTTCC CGCCACCATT GAACTCGCGC TATGCGCGAT TTTTTTCGCC TTGTTGCTGG GCATTCCGGC GGGTATTCTG GCGGCGGTAC GACGAAATAC GATATTCGAC CATGGCGTGA TGGGTGTGTC ACTCACCGGC TATTCGATGC CGATCTTCTG GTGGGGCTTG CTGCTGATCC TGCTGTTTTC AGTGCAACTC GACCTGACGC CGGTGTCAGG TCGCATTGCC GTGGAGTATT TCATTGAACC CGTCACCGGC CTGCTGCTGA TTGACAGCTG GCTGGCTGGC GACAAAGGGG CCTTCTGGTC CGCCTTCACC CATTTGATTT TGCCGACCAT CGTGCTCGGG ACCAATCCAT TGGCGGTAAT TGCCCGCATG ACGCGCTCAG CCATGCTTGA AGTACTGGGT GAAGACTACA TTCGCACCGC GCGCGCCAAG GGCTTGTCCA ACCTGCGGGT GGTCGGTCTG CACGCCTTGC GCAATGCGCT GATTCCGGTG ATCACGGTGA TTGGATTACA GGTCGGTGTG CTGTTTACCG GCGCCATCCT GACCGAAACC ATTTTTTCCT GGCCGGGCGT GGGCAAGTGG CTGATTGAAG CGATTGGCCG ACGCGACTAT CCCGTTTTGC AAGGTGGCAT GCTGCTGCTC GGCATGATCG TGATGACGGT CAACCTGCTG GTGGACGTGA CCTACGGCAT CATCAACCCC CGCATCCGGC ACTGA
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Protein sequence | MLRFLLTRFS LIIPTFIGMT LLAFFLIRLV PGDPIETLAG ERGIDAVRHA TLLKEYGLDR PVLVQYGIYI GRVLQGDLGK SIITHEPVLR EFMTLFPATI ELALCAIFFA LLLGIPAGIL AAVRRNTIFD HGVMGVSLTG YSMPIFWWGL LLILLFSVQL DLTPVSGRIA VEYFIEPVTG LLLIDSWLAG DKGAFWSAFT HLILPTIVLG TNPLAVIARM TRSAMLEVLG EDYIRTARAK GLSNLRVVGL HALRNALIPV ITVIGLQVGV LFTGAILTET IFSWPGVGKW LIEAIGRRDY PVLQGGMLLL GMIVMTVNLL VDVTYGIINP RIRH
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