| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_1950 |
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| Symbol | dppF |
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| ID | 3964132 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | - |
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| Start bp | 2094271 |
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| End bp | 2095275 |
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| Gene Length | 1005 bp |
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| Protein Length | 334 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637916769 |
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| Product | dipeptide transporter ATP-binding subunit |
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| Protein accession | YP_523206 |
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| Protein GI | 89900735 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG4608] ABC-type oligopeptide transport system, ATPase component |
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| TIGRFAM ID | [TIGR01727] oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.189819 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAGCCCGT CTGAAACACC CGTGGTCGTC GCGCGCGATC TGCGCCAGGT CTACAAAATC
AGCCGCGGCT TTCTGCACGC CGCGGATCAA CTGCAGGCGG TGAGCGGTGT CTCCTTCACG
CTGCACGCCG GCAAGACACT GGCGGTGGTG GGCGAGTCGG GTTGTGGCAA GTCCACGCTG
GCGCGCATGG TGTCGCTGAT CGAGACGCCC ACTGCCGGTG AACTGCGCCT CAATGGCGTG
GACGTGGTGA AAGCCAGCAC CACTGAACGC CATGCGCTGC GCCGTGCCGT GCAACTGGTG
TTCCAGAATC CGTATGGCTC ACTGAATCCG CGCAAGAAAA TCGGTGCCAT TCTGGAGGCC
CCGCTGGAGA TCAATACCGA ATTGACGGCG GCACAACGTG CCGAGCAGGC ACGCGCCATG
CTGGCCCTGG TCGGCCTGCG CCCGGAGCAC TATGACCGCT ACCCGCACAT GTTCTCGGGC
GGCCAGCGCC AGCGCGTGGC CATAGCGCGC GCCCTCATGC TCAGACCAGC GGTGATCGTG
GCTGACGAGC CGGTGTCGGC GCTCGATGTC TCGATTCAGG CCCAGGTCCT CAACCTGCTG
GCCGACTTGC AACAAGAGTT GGGCCTGGCC TACCTGTTTA TCTCGCACGA CCTGGGCGTG
GTGCGCTACA TTGCCCACGA CCTGCTGGTG ATGTACCTGG GCCACGCGGT CGAACAAGGC
GAGAAAAAAA CCATCTTCGC GCAGCCGCTG CATCCCTACA CGCAAGCACT GCTGGCCTCT
ACACCGGGCA TCATTGGCAG CGGCACGGCG CACAAACGTA TCGTGCTCAC GGGTGAGTTG
CCCTCGCCTT TGAACCCACC CAGCGGTTGT GTGTTTTCCA CCCGCTGCCC CAATGTGGTG
GCACGCTGTC ACACGGAGCG TCCGGTCCTG CGCGAACTGG CTGGCCGCCA GGTGGCGTGC
CACGAGGCCG AGCAATTTAT CCAACCCGCT GCTGAGCAGC ATTAA
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| Protein sequence | MSPSETPVVV ARDLRQVYKI SRGFLHAADQ LQAVSGVSFT LHAGKTLAVV GESGCGKSTL
ARMVSLIETP TAGELRLNGV DVVKASTTER HALRRAVQLV FQNPYGSLNP RKKIGAILEA
PLEINTELTA AQRAEQARAM LALVGLRPEH YDRYPHMFSG GQRQRVAIAR ALMLRPAVIV
ADEPVSALDV SIQAQVLNLL ADLQQELGLA YLFISHDLGV VRYIAHDLLV MYLGHAVEQG
EKKTIFAQPL HPYTQALLAS TPGIIGSGTA HKRIVLTGEL PSPLNPPSGC VFSTRCPNVV
ARCHTERPVL RELAGRQVAC HEAEQFIQPA AEQH
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