| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_1943 |
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| Symbol | |
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| ID | 3964125 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | + |
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| Start bp | 2086646 |
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| End bp | 2087641 |
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| Gene Length | 996 bp |
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| Protein Length | 331 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637916763 |
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| Product | tRNA-dihydrouridine synthase A |
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| Protein accession | YP_523200 |
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| Protein GI | 89900729 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0042] tRNA-dihydrouridine synthase |
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| TIGRFAM ID | [TIGR00742] tRNA dihydrouridine synthase A |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTGAGCC CGAAACCCGT TCCCCCCGAC CGCTGGAGGC TGTCCGTTGC CCCGATGCTG
GACTGGACCG ATCGCCATTG CCGTTATTTC CATCGCCTGC TCACACAGCA TGCGCTGCTT
TACACCGAGA TGGTGACGAC TGGCGCCCTG ATTTATGGCG ACGTGTCACG TCACCTGCGC
TACAACGAGC AAGAACATCC AGTCGCATTG CAGTTGGGTG GCAGCGAACC GGCCGACCTG
GCGCGGTGTG CCAAGCTCGG TGAAGAGTGG GGTTATGACG AGGTCAACTT GAACTGTGGC
TGCCCGAGCG AGCGGGTGCA GCGCGGCGCG TTTGGCGCCT GCCTGATGGC TGAGCCGCAG
CTGGTGGCGG ATTGCGTCAA GGCGATGGTG GATGTGGTGT CGGTGCCGGT CACCGTGAAA
CACCGAATTG GCATCGACAA AACCGAGAGT TACGAATTCG TGCGTGATTT TGTTGGCAGC
GTCAGCGAGG CCGGCTGTCG CACTTTCATC GTGCACGCCC GCAATGCCTG GCTCAAGGGT
CTGAGTCCAA AAGAAAACCG TGACGTGCCG CCCCTGCGCT ATGAGCTGGC CTACCAGCTC
AAACGCGATT TTCCCTCGCT CGTCATCGTC ATCAATGGCG GCATCACCAG CAGCGCGCAG
ATCGCCGGGC ACCTGTTGCA CCTGGACGGC GTGATGCTGG GGCGCGAGGC CTATCACAAC
CCGTGGTGGC TGGCTTCCTG GGATGCGACG TTCTTCGGCG CTGACGCGAC AGAAACCACC
CGCGAGCAGG TCGAGCAGCA GATGTGCGAC TACATGACGC GCGAAGCCGC CGAGCACGGC
ACACCCTGGC CCACCATGGC CCGCCACATG CTGGGCTTGC GTCACGGACT GCCGGGTGCG
CGTCACTGGC GCCAGGTCTG GAGTGATCAC AAGCTCAAGG GGCTGCCTGC GCATGATGTG
ATGGCCCTGG CGCACACCCC GGTGCCGGCC ACGTAA
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| Protein sequence | MLSPKPVPPD RWRLSVAPML DWTDRHCRYF HRLLTQHALL YTEMVTTGAL IYGDVSRHLR
YNEQEHPVAL QLGGSEPADL ARCAKLGEEW GYDEVNLNCG CPSERVQRGA FGACLMAEPQ
LVADCVKAMV DVVSVPVTVK HRIGIDKTES YEFVRDFVGS VSEAGCRTFI VHARNAWLKG
LSPKENRDVP PLRYELAYQL KRDFPSLVIV INGGITSSAQ IAGHLLHLDG VMLGREAYHN
PWWLASWDAT FFGADATETT REQVEQQMCD YMTREAAEHG TPWPTMARHM LGLRHGLPGA
RHWRQVWSDH KLKGLPAHDV MALAHTPVPA T
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