Gene Rfer_1939 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRfer_1939 
Symbol 
ID3964121 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodoferax ferrireducens T118 
KingdomBacteria 
Replicon accessionNC_007908 
Strand+ 
Start bp2081476 
End bp2082153 
Gene Length678 bp 
Protein Length225 aa 
Translation table11 
GC content63% 
IMG OID637916759 
Producthypothetical protein 
Protein accessionYP_523196 
Protein GI89900725 
COG category[S] Function unknown 
COG ID[COG2836] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.172428 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAATCCT CTCTGGCTGT CACCGCCTTG TTGATGGGCC TGGCCGGAGG GCCGCACTGC 
ATTGCCATGT GTGGCGCTGC CTGTGCCGGG ATCGGGCAAG CAGCAGGCCC GCGCAAGAAT 
TCAGCCATGT GGAGCTTCCA GATCGGTCGG GTATTGGGCT ATTCCGCACT CGGGTCGCTG 
GCGGCAGCCT CGATGCAGGG TTTGGGCTGG TTGACGGTGC AGTCGGCCGC GTTGCGCCCG 
GTGTGGACGC TGTTTCATGT CGCAACCCTG GTGCTGGGCC TGTTGTTACT CTGGAAAGCG 
CAGCAACCGG TTTGGCTGGA GCAGGCGGGC AAAAAAATAT GGATTGGTGC ACGCTCCCTG 
GCTGCCGGGC GGGGCCGGGG TGCGCCACTG GTGATTGGCG CTCTCTGGAC TTTTTTGCCC 
TGCGGCTTGC TCTATTCGGC GCTGCTGGTT GCCGCTTTGA CAGGCCATGC CCTTGAAGGC 
GCCTGGGTAA TGGCCTTGTT TGCCTTAGGC ACCAGTGTCT CCATGATGGC GGGTCCCTGG 
TTATGGCTGC GTTTGCGGGG TAATGGGGCT GGCGATTGGG GTGTGCGCCT GGCCGGTCTG 
GCATTGGCTG CCAGTTCGGT CTGGGCTTTG TGGATGGCGT ATGCCCACGA CGCCGCGCCC 
TGGTGCGCAA CGCCTTGA
 
Protein sequence
MQSSLAVTAL LMGLAGGPHC IAMCGAACAG IGQAAGPRKN SAMWSFQIGR VLGYSALGSL 
AAASMQGLGW LTVQSAALRP VWTLFHVATL VLGLLLLWKA QQPVWLEQAG KKIWIGARSL 
AAGRGRGAPL VIGALWTFLP CGLLYSALLV AALTGHALEG AWVMALFALG TSVSMMAGPW 
LWLRLRGNGA GDWGVRLAGL ALAASSVWAL WMAYAHDAAP WCATP