| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_1931 |
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| Symbol | |
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| ID | 3960769 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | + |
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| Start bp | 2075325 |
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| End bp | 2075951 |
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| Gene Length | 627 bp |
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| Protein Length | 208 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 637916751 |
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| Product | cbb3-type cytochrome c oxidase subunit II |
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| Protein accession | YP_523188 |
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| Protein GI | 89900717 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG2993] Cbb3-type cytochrome oxidase, cytochrome c subunit |
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| TIGRFAM ID | [TIGR00781] cytochrome c oxidase, cbb3-type, subunit II |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.00642611 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGCAAACA ACAAGGCAAG CGGCGCACTG TCGCACGAAA GAATCGAAAC CAACAACTTC
CTGATGATCG TTTTGATCTT GCTGGTGTTG CTGGTGGGTG GCTTGGTGGA AATTGTTCCG
CTGTTTTTCC AGAAGTCCAC GACTGAGCCG GTCAAGGGCC TGCAGCCTTA CACGGCACTC
CAGTTGGCGG GGCGTGACAT TTACACTCGA GAGGGTTGCT ACAACTGCCA CTCACAAATG
ATTCGACCGT TCCGCGCCGA AACCCTGCGT TACGGCCACT ATTCCGTAGC GGGCGAATTT
GTCTACGACC ATCCATTTCA ATGGGGCAGC AAGCGCACCG GTCCTGATCT GCATCGCGTC
GGTGGCAAGT ACAGCGATAA GTGGCACACA ACGCACCTGA ACAATCCGCG GGATTTGGTG
CCTGAATCGA ATATGCCGGC TTATCCATGG CTTCTCAGAG ACTCTGTCGA TGCGGATTCG
ATGCCGGCGC ACATGAAAGC ATTGCGGATC GTCGGCGTGC CTTATACCGA TGAGCAAATA
GCCAAGTCAT CGGAAGAGTT GAGAGGCAAG AAAGAAGTTG AGGCCGTCAT TGCCTATTTG
CAGGTTTTAG GAACCTTGGT CAAGTAA
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| Protein sequence | MANNKASGAL SHERIETNNF LMIVLILLVL LVGGLVEIVP LFFQKSTTEP VKGLQPYTAL
QLAGRDIYTR EGCYNCHSQM IRPFRAETLR YGHYSVAGEF VYDHPFQWGS KRTGPDLHRV
GGKYSDKWHT THLNNPRDLV PESNMPAYPW LLRDSVDADS MPAHMKALRI VGVPYTDEQI
AKSSEELRGK KEVEAVIAYL QVLGTLVK
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