| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_1921 |
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| Symbol | |
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| ID | 3960759 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | - |
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| Start bp | 2062504 |
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| End bp | 2064198 |
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| Gene Length | 1695 bp |
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| Protein Length | 564 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637916741 |
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| Product | dihydroxy-acid dehydratase |
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| Protein accession | YP_523178 |
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| Protein GI | 89900707 |
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| COG category | [E] Amino acid transport and metabolism
[G] Carbohydrate transport and metabolism |
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| COG ID | [COG0129] Dihydroxyacid dehydratase/phosphogluconate dehydratase |
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| TIGRFAM ID | [TIGR00110] dihydroxy-acid dehydratase |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.472202 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGACATCA AACCAGTCAT CCTGAACCCA CGCAGCAAAA ACATCACCGA GGGCAAATCG
CGGGCGCCCA ATCGCTCCAT GTACTACGCC ATGGGCTACG AGGCCGACGA CTTCAAGAAG
CCCATGATCG GTGTCGCCAA CGGCCACAGC ACCATCACAC CGTGCAACTC CGGCCTGCAA
AAGCTGGCCG ATGCCGCCAT TGCCGCGATT GAAGAAGCCG GCGGCAACGC CCAGGTGTTC
GGCACCCCCA CCATTTCCGA CGGCATGTCG ATGGGCACCG AGGGCATGAA GTATTCGCTG
GTCAGCCGCG AAGTAATTTC CGACTGTATT GAGACCTGCG TGCAGGGCCA GTGGATGGAC
GGTGTGCTGG TGATCGGCGG TTGCGACAAA AACATGCCCG GCGGCCTGAT GGGCATGCTG
CGCGCCAATG TGCCCGCGAT TTATGTCTAC GGCGGCACCA TTTTGCCGGG CCATTACAAG
GGCCAGGACC TCAACATCGT GAGCGTGTTC GAGGCCGTGG GCGAGAACGC CGCAGGTCGC
ATGAGCGACG AAGATCTGTT GGAGATTGAG CGCCGCGCCA TCCCTGGCCC CGGCTCTTGC
GGCGGCATGT ACACCGCCAA CACCATGAGT TCGGCCTTTG AGGCACTGGG CATCTCCCTG
GTCTACTCGT CCACCATGGC CAATCCGCAT GACGAGAAGC TGAATTCGGC CCAAGAATCA
GCCAAGGTGC TGATTGAAGC CATCAAGAAC GACCTGAAGC CGCGTGACAT CGTGACCCGC
AAATCGATTG AGAACGCGAT TGCCGTTGTG ATGGCGATTG GCGGCTCGAC CAACGCGGTG
CTGCATTTCC TGGCGATTGC CCATGCCGCA GGCGTGGAGT GGACGATTGA CGACTTTGAG
CGTGTACGCC AAAAAACCCC GGTGTTGTGC GACCTCAAAC CGAGCGGCAA GTACCTGGCG
GTGGACCTGC ACCGCGCCGG TGGCATTCCG CAAGTGATGA AGATGCTGCT AAGCGCTGGC
CTGCTGCACG GCGACTGCAT CACCATCACC GGCCAGACCG TGGCTGAAGT GTTGAAAGAC
GTGCCGGATG CACCACGGGC AGACCAAAAC GTGATTCGGC CGATGAACAA ACCGATGTAT
GCCCAGGGCC ATCTGGCCAT TCTGAAGGGC AACCTGGCCC CGGAAGGCTG CGTCGCCAAG
ATCACCGGCC TGAAAAACCC GGTCATGACC GGCCCGGCAC GCGTCTTTGA GGACGAACAA
TCGGCCTTGG CCGCGATTCT GGCCAACAAG ATTGTGGCCG GCGATGTCAT GGTGCTGCGC
TACCTCGGCC CCAAAGGCGG CCCCGGCATG CCCGAAATGC TGGCCCCGAC CGGCGCGCTG
GTCGGCCAGG GTTTGGGCGA ATCAGTCGGC CTGATCACCG ACGGCCGTTT CTCCGGTGGC
ACCTGGGGCA TGGTGGTCGG TCACGTGGCA CCGGAAGCGG CTGCCGGCGG CCTGATTGCT
TTGATTGAAG AAGGCGACTC GATCACCATC GACGCGCACC AGTTGCTGCT GCAACTCAAC
GTCAGCGACG ACATCATTGC CAAACGCCGT AGCGTGTGGA CGGCCCCGCA GCCGCGCTAC
ACACGCGGCG TGCAGGCCAA GTTTGCCTTT AACGCATCCA CCGCCAGCAA GGGTGCGGTG
CTGGACAACT ACTGA
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| Protein sequence | MDIKPVILNP RSKNITEGKS RAPNRSMYYA MGYEADDFKK PMIGVANGHS TITPCNSGLQ
KLADAAIAAI EEAGGNAQVF GTPTISDGMS MGTEGMKYSL VSREVISDCI ETCVQGQWMD
GVLVIGGCDK NMPGGLMGML RANVPAIYVY GGTILPGHYK GQDLNIVSVF EAVGENAAGR
MSDEDLLEIE RRAIPGPGSC GGMYTANTMS SAFEALGISL VYSSTMANPH DEKLNSAQES
AKVLIEAIKN DLKPRDIVTR KSIENAIAVV MAIGGSTNAV LHFLAIAHAA GVEWTIDDFE
RVRQKTPVLC DLKPSGKYLA VDLHRAGGIP QVMKMLLSAG LLHGDCITIT GQTVAEVLKD
VPDAPRADQN VIRPMNKPMY AQGHLAILKG NLAPEGCVAK ITGLKNPVMT GPARVFEDEQ
SALAAILANK IVAGDVMVLR YLGPKGGPGM PEMLAPTGAL VGQGLGESVG LITDGRFSGG
TWGMVVGHVA PEAAAGGLIA LIEEGDSITI DAHQLLLQLN VSDDIIAKRR SVWTAPQPRY
TRGVQAKFAF NASTASKGAV LDNY
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