| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_1919 |
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| Symbol | |
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| ID | 3960757 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | + |
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| Start bp | 2059202 |
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| End bp | 2061814 |
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| Gene Length | 2613 bp |
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| Protein Length | 870 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637916739 |
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| Product | ATPase AAA-2 |
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| Protein accession | YP_523176 |
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| Protein GI | 89900705 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0542] ATPases with chaperone activity, ATP-binding subunit |
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| TIGRFAM ID | [TIGR03346] ATP-dependent chaperone ClpB |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.494579 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGAATCG AAAAACTCAC CACCAAATTT CAGGAAGCCT TGGGCGAGGC GCAAACGCTG
GCCCTGGGCA GTGACAATGC CTATATCGAG CCGGTCCATG TGCTGATCGC CATGCTCAAG
CAAGAGGACG GCCCGAAAGC CTTGCTGCAG CGCGCTGGCG TCAATGTGCC AGGGCTTCTG
GCCGCCGCCG AAGCTGCCAT GAAGAGGCTG CCCGAGGTGA CCGGGCAAGA GCAGGTGCAG
GTCGGGCGCG ACATGGTGTC GCTGTTGCAG GCAGCCGAGA AAGAATCCAT CAAGCGCGGG
GACAAGTTTG TCGCCAGTGA GTTGTTTTTG CTGGTGCTGA CGGACAGCAA GCAGGACATC
AGCAAAATTG CCAGAGAAAA CGGCTTGACC CGCAAGTCGC TGGAAGCGGC GATTGACGCC
GTGCGTGGTG GCCAGAACGT GGACAGCGCG GATGCCGAAG ACCAGCGTGA ATCGCTCAAA
AAATACTGTA TTGACCTGAC CGAGCGGGCT CGCCTGGGCA AGCTTGACCC GGTGATTGGT
CGCGACGATG AAATCCGCCG TGCCATCCAG GTGCTGCAAC GGCGCACCAA AAACAATCCC
GTCCTGATTG GCGAGCCCGG TGTCGGCAAG ACCGCCATTG TGGAAGGCCT GGCGCAACGC
ATCGTCGCCG GTGAAGTGCC CGATTCACTC AAGGGCAAGC GGGTTTTGTC GCTCGACATG
GCCTCCTTGC TGGCAGGGGC CAAGTTCCGT GGCGAGTTTG AAGAGCGGTT GAAAAATGTG
CTCAAAGACC TGGCCAAGGA CGAAGGCCAG ACCATTGTGT TCATTGACGA GTTGCACACC
ATGGTGGGCG CCGGCAAGGC CGAGGGCGCA ATGGATGCGG GCAATATGCT CAAACCCGCC
CTGGCGCGAG GTGAGTTGCA CTGCGTGGGC GCGACCACGC TGGACGAATA CCGCAAGTAC
GTCGAAAAAG ACGCCGCGCT GGAACGCCGC TTCCAGAAAA TCCTGGTCGG AGAGCCCACG
GTGGAAGACA CCATCGCCAT CCTGCGCGGT CTGCAGGCCA AGTATGAAAC CCACCATGGC
GTGCAGATCA CCGACCCGGC GATCGTCGCG GCCGCGGAGT TGAGCCACCG TTACATCACC
GACCGTTTCC TGCCCGACAA GGCGATTGAC CTGATTGACG AGGCGGCCTC CAAGATCAAG
ATCGAGCTCG ACTCCAAGCC TGAGGTGATG GACAAGCTCG ACCGGCGATT GATCCAGTTG
CAGATCGAGC GCGAAGCCGT GCGCCGCGAG AAGGATGAAG CCTCGCAAAA ACGCTTTGGC
CTGATCGAGG AGGAGATCGT CCGGTTGCAG AAGGAGATTG CCGATCTGGA CGAAATCTGG
AAGGCCGAAA AAGCCCAGGC CCAGGGCTCC AAAGCGATCA TGGAAGAGAT CGAAAAGGTG
CGTTTCCAGA TTGAGGAGCT CACCCGCAAG GGCGATTTCA ACCGCGCTGG CGAGTTGCAG
TATGGCAAGC TGCCGGGGCT GGAAAAGCAG CTCAAGGACG CACAAGACCA GGAAGCGGGC
AGAGCCAAGA CAGCCAAGGA CGGCGGGCGC GCGCAGTTGC TGCGCACCAT GGTCGGTGCC
GAAGAAATTG CCGAAGTGGT GAGCCGTGCC ACCGGTATTC CGGTGTCCAA AATGATGCAG
GGTGAGCGCG ACAAACTGCT GCTGATGGAG GCCAAACTGC ACCAGCGCGT GGTCGGGCAG
GACGAAGCCA TCACGGCGGT CGCCAACGCC ATCCGCCGCT CGCGCGCCGG CTTGTCGGAC
CCGAATCGGC CGACCGGCTC GTTCCTGTTC CTCGGCCCCA CGGGGGTTGG CAAGACCGAG
CTGTGCAAGG CGCTGGCCGG TTTCCTGTTT GACTCGGAAG ACCACCTGGT GCGCATCGAC
ATGAGTGAGT TCATGGAGAA ACATTCGGTG GCGCGATTGA TTGGCGCGCC ACCCGGCTAT
GTCGGTTACG AGGAGGGCGG CTACCTGACC GAAGCCGTGC GCCGCAAGCC CTACAGCGTG
CTGCTGCTCG ATGAGGTCGA AAAAGCGCAT CCGGATGTGT TCAACGTGTT GCTGCAAGTG
CTTGACGATG GGCGTTTGAC TGACGGCCAG GGCCGCACGG TGGACTTCAA GAACACCGTG
ATCGTGATGA CCAGTAACAT CGGTTCGCAG ATGATCCAGA GCATGGTCGG GCAAGACAGC
GAGGACATCA AGGACGCGGT GACGGCGGAG CTGAAAAATT ACTTCCGGCC CGAATTTTTG
AATCGTATCG ACGAGACCGT GGTGTTCCAC GCGCTCGATG CATCGCACAT TGCCAAGATT
GCCGCAATCC AGATTCAGGT GCTGCAAGAG CGCCTGGCCA AGATGGAGTT GACGCTGGAG
GTGTCTCCTG CGGCGCTGGC TGAGCTGGCC AAGGTCGGTT TCGACCCGGT GTTTGGCGCG
CGACCCCTGC GCCGTGCGAT CCAGCAACGG ATCGAAAACC CGCTGTCCAA GCTGCTGCTG
GAAGGCAAGT TCGCGCCGAA AGACGTGATT CCTGTCGATG TGGACCCGAT CCGCTCGCCC
GGGCAGTTCA GCTTTGAGCG GGTGGTGCAC TGA
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| Protein sequence | MRIEKLTTKF QEALGEAQTL ALGSDNAYIE PVHVLIAMLK QEDGPKALLQ RAGVNVPGLL
AAAEAAMKRL PEVTGQEQVQ VGRDMVSLLQ AAEKESIKRG DKFVASELFL LVLTDSKQDI
SKIARENGLT RKSLEAAIDA VRGGQNVDSA DAEDQRESLK KYCIDLTERA RLGKLDPVIG
RDDEIRRAIQ VLQRRTKNNP VLIGEPGVGK TAIVEGLAQR IVAGEVPDSL KGKRVLSLDM
ASLLAGAKFR GEFEERLKNV LKDLAKDEGQ TIVFIDELHT MVGAGKAEGA MDAGNMLKPA
LARGELHCVG ATTLDEYRKY VEKDAALERR FQKILVGEPT VEDTIAILRG LQAKYETHHG
VQITDPAIVA AAELSHRYIT DRFLPDKAID LIDEAASKIK IELDSKPEVM DKLDRRLIQL
QIEREAVRRE KDEASQKRFG LIEEEIVRLQ KEIADLDEIW KAEKAQAQGS KAIMEEIEKV
RFQIEELTRK GDFNRAGELQ YGKLPGLEKQ LKDAQDQEAG RAKTAKDGGR AQLLRTMVGA
EEIAEVVSRA TGIPVSKMMQ GERDKLLLME AKLHQRVVGQ DEAITAVANA IRRSRAGLSD
PNRPTGSFLF LGPTGVGKTE LCKALAGFLF DSEDHLVRID MSEFMEKHSV ARLIGAPPGY
VGYEEGGYLT EAVRRKPYSV LLLDEVEKAH PDVFNVLLQV LDDGRLTDGQ GRTVDFKNTV
IVMTSNIGSQ MIQSMVGQDS EDIKDAVTAE LKNYFRPEFL NRIDETVVFH ALDASHIAKI
AAIQIQVLQE RLAKMELTLE VSPAALAELA KVGFDPVFGA RPLRRAIQQR IENPLSKLLL
EGKFAPKDVI PVDVDPIRSP GQFSFERVVH
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