Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rfer_1919 |
Symbol | |
ID | 3960757 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodoferax ferrireducens T118 |
Kingdom | Bacteria |
Replicon accession | NC_007908 |
Strand | + |
Start bp | 2059202 |
End bp | 2061814 |
Gene Length | 2613 bp |
Protein Length | 870 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637916739 |
Product | ATPase AAA-2 |
Protein accession | YP_523176 |
Protein GI | 89900705 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0542] ATPases with chaperone activity, ATP-binding subunit |
TIGRFAM ID | [TIGR03346] ATP-dependent chaperone ClpB |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.494579 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGAATCG AAAAACTCAC CACCAAATTT CAGGAAGCCT TGGGCGAGGC GCAAACGCTG GCCCTGGGCA GTGACAATGC CTATATCGAG CCGGTCCATG TGCTGATCGC CATGCTCAAG CAAGAGGACG GCCCGAAAGC CTTGCTGCAG CGCGCTGGCG TCAATGTGCC AGGGCTTCTG GCCGCCGCCG AAGCTGCCAT GAAGAGGCTG CCCGAGGTGA CCGGGCAAGA GCAGGTGCAG GTCGGGCGCG ACATGGTGTC GCTGTTGCAG GCAGCCGAGA AAGAATCCAT CAAGCGCGGG GACAAGTTTG TCGCCAGTGA GTTGTTTTTG CTGGTGCTGA CGGACAGCAA GCAGGACATC AGCAAAATTG CCAGAGAAAA CGGCTTGACC CGCAAGTCGC TGGAAGCGGC GATTGACGCC GTGCGTGGTG GCCAGAACGT GGACAGCGCG GATGCCGAAG ACCAGCGTGA ATCGCTCAAA AAATACTGTA TTGACCTGAC CGAGCGGGCT CGCCTGGGCA AGCTTGACCC GGTGATTGGT CGCGACGATG AAATCCGCCG TGCCATCCAG GTGCTGCAAC GGCGCACCAA AAACAATCCC GTCCTGATTG GCGAGCCCGG TGTCGGCAAG ACCGCCATTG TGGAAGGCCT GGCGCAACGC ATCGTCGCCG GTGAAGTGCC CGATTCACTC AAGGGCAAGC GGGTTTTGTC GCTCGACATG GCCTCCTTGC TGGCAGGGGC CAAGTTCCGT GGCGAGTTTG AAGAGCGGTT GAAAAATGTG CTCAAAGACC TGGCCAAGGA CGAAGGCCAG ACCATTGTGT TCATTGACGA GTTGCACACC ATGGTGGGCG CCGGCAAGGC CGAGGGCGCA ATGGATGCGG GCAATATGCT CAAACCCGCC CTGGCGCGAG GTGAGTTGCA CTGCGTGGGC GCGACCACGC TGGACGAATA CCGCAAGTAC GTCGAAAAAG ACGCCGCGCT GGAACGCCGC TTCCAGAAAA TCCTGGTCGG AGAGCCCACG GTGGAAGACA CCATCGCCAT CCTGCGCGGT CTGCAGGCCA AGTATGAAAC CCACCATGGC GTGCAGATCA CCGACCCGGC GATCGTCGCG GCCGCGGAGT TGAGCCACCG TTACATCACC GACCGTTTCC TGCCCGACAA GGCGATTGAC CTGATTGACG AGGCGGCCTC CAAGATCAAG ATCGAGCTCG ACTCCAAGCC TGAGGTGATG GACAAGCTCG ACCGGCGATT GATCCAGTTG CAGATCGAGC GCGAAGCCGT GCGCCGCGAG AAGGATGAAG CCTCGCAAAA ACGCTTTGGC CTGATCGAGG AGGAGATCGT CCGGTTGCAG AAGGAGATTG CCGATCTGGA CGAAATCTGG AAGGCCGAAA AAGCCCAGGC CCAGGGCTCC AAAGCGATCA TGGAAGAGAT CGAAAAGGTG CGTTTCCAGA TTGAGGAGCT CACCCGCAAG GGCGATTTCA ACCGCGCTGG CGAGTTGCAG TATGGCAAGC TGCCGGGGCT GGAAAAGCAG CTCAAGGACG CACAAGACCA GGAAGCGGGC AGAGCCAAGA CAGCCAAGGA CGGCGGGCGC GCGCAGTTGC TGCGCACCAT GGTCGGTGCC GAAGAAATTG CCGAAGTGGT GAGCCGTGCC ACCGGTATTC CGGTGTCCAA AATGATGCAG GGTGAGCGCG ACAAACTGCT GCTGATGGAG GCCAAACTGC ACCAGCGCGT GGTCGGGCAG GACGAAGCCA TCACGGCGGT CGCCAACGCC ATCCGCCGCT CGCGCGCCGG CTTGTCGGAC CCGAATCGGC CGACCGGCTC GTTCCTGTTC CTCGGCCCCA CGGGGGTTGG CAAGACCGAG CTGTGCAAGG CGCTGGCCGG TTTCCTGTTT GACTCGGAAG ACCACCTGGT GCGCATCGAC ATGAGTGAGT TCATGGAGAA ACATTCGGTG GCGCGATTGA TTGGCGCGCC ACCCGGCTAT GTCGGTTACG AGGAGGGCGG CTACCTGACC GAAGCCGTGC GCCGCAAGCC CTACAGCGTG CTGCTGCTCG ATGAGGTCGA AAAAGCGCAT CCGGATGTGT TCAACGTGTT GCTGCAAGTG CTTGACGATG GGCGTTTGAC TGACGGCCAG GGCCGCACGG TGGACTTCAA GAACACCGTG ATCGTGATGA CCAGTAACAT CGGTTCGCAG ATGATCCAGA GCATGGTCGG GCAAGACAGC GAGGACATCA AGGACGCGGT GACGGCGGAG CTGAAAAATT ACTTCCGGCC CGAATTTTTG AATCGTATCG ACGAGACCGT GGTGTTCCAC GCGCTCGATG CATCGCACAT TGCCAAGATT GCCGCAATCC AGATTCAGGT GCTGCAAGAG CGCCTGGCCA AGATGGAGTT GACGCTGGAG GTGTCTCCTG CGGCGCTGGC TGAGCTGGCC AAGGTCGGTT TCGACCCGGT GTTTGGCGCG CGACCCCTGC GCCGTGCGAT CCAGCAACGG ATCGAAAACC CGCTGTCCAA GCTGCTGCTG GAAGGCAAGT TCGCGCCGAA AGACGTGATT CCTGTCGATG TGGACCCGAT CCGCTCGCCC GGGCAGTTCA GCTTTGAGCG GGTGGTGCAC TGA
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Protein sequence | MRIEKLTTKF QEALGEAQTL ALGSDNAYIE PVHVLIAMLK QEDGPKALLQ RAGVNVPGLL AAAEAAMKRL PEVTGQEQVQ VGRDMVSLLQ AAEKESIKRG DKFVASELFL LVLTDSKQDI SKIARENGLT RKSLEAAIDA VRGGQNVDSA DAEDQRESLK KYCIDLTERA RLGKLDPVIG RDDEIRRAIQ VLQRRTKNNP VLIGEPGVGK TAIVEGLAQR IVAGEVPDSL KGKRVLSLDM ASLLAGAKFR GEFEERLKNV LKDLAKDEGQ TIVFIDELHT MVGAGKAEGA MDAGNMLKPA LARGELHCVG ATTLDEYRKY VEKDAALERR FQKILVGEPT VEDTIAILRG LQAKYETHHG VQITDPAIVA AAELSHRYIT DRFLPDKAID LIDEAASKIK IELDSKPEVM DKLDRRLIQL QIEREAVRRE KDEASQKRFG LIEEEIVRLQ KEIADLDEIW KAEKAQAQGS KAIMEEIEKV RFQIEELTRK GDFNRAGELQ YGKLPGLEKQ LKDAQDQEAG RAKTAKDGGR AQLLRTMVGA EEIAEVVSRA TGIPVSKMMQ GERDKLLLME AKLHQRVVGQ DEAITAVANA IRRSRAGLSD PNRPTGSFLF LGPTGVGKTE LCKALAGFLF DSEDHLVRID MSEFMEKHSV ARLIGAPPGY VGYEEGGYLT EAVRRKPYSV LLLDEVEKAH PDVFNVLLQV LDDGRLTDGQ GRTVDFKNTV IVMTSNIGSQ MIQSMVGQDS EDIKDAVTAE LKNYFRPEFL NRIDETVVFH ALDASHIAKI AAIQIQVLQE RLAKMELTLE VSPAALAELA KVGFDPVFGA RPLRRAIQQR IENPLSKLLL EGKFAPKDVI PVDVDPIRSP GQFSFERVVH
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