Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rfer_1902 |
Symbol | |
ID | 3963231 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodoferax ferrireducens T118 |
Kingdom | Bacteria |
Replicon accession | NC_007908 |
Strand | - |
Start bp | 2042213 |
End bp | 2043172 |
Gene Length | 960 bp |
Protein Length | 319 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637916722 |
Product | inner-membrane translocator |
Protein accession | YP_523159 |
Protein GI | 89900688 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1172] Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.0227487 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCCACGA CAAACAAACG CCCCATTCCC TGGGGAGCGC TTGGCCCCTG GATCGCATTG GCGGTCACTT GCCTGTTTTT TGCCACCCAG TCAGCGCGCT TTTTGAGCGG CGAAAACCTG TCGCTGGTGC TGCAACAAGT GATGGTGGTA GGCGTATTGG CCATTGGCCA GACCCTGATC ATTCTGACCG CCGGCATTGA CCTGTCGTGC GGCATGGTGA TGGCCCTGGG CGGCGTTGTC ATGACCAAAT TTGCCGTCGA CTACGGCCTG AACCCCTACG CGGCCATTGC CTGCGGCCTG GGCGTGACCA CCGGTTTTGG CCTGCTCAAC GGCCTGCTGG TGACGCGCAT CAAACTGCCT CCTTTCATCG TGACGCTGGG CACCCTGAAC ATTGCCTTTG CCATCACCCA GATCTACTCT GAGTCTCAAA CCATCACCAA CCTGCCCAGC GTCATGACCG CGCTGGGAGA GACCTTCAAT CTTGGCAGCA CCGAAGTCAG CCTGGGCACG GTGACGATGT TGCTGCTGTA CGCCATGGCC TGGTTTGTGC TGCGCGAAAC CGCGCCGGGA CGCCACCTGT ACGCCGTGGG CAACAACCCG GAAGCGGCGC GCCTGACCGG CATCAGCGTG GACCGGGTGC TGGTGATTGT TTACTCGCTG GCCGGCCTGT TTTACGGCAT TGCCGCCATG CTGTCGGTAG CGCGCACGGG GGTGGGCGAC CCCAACGCCG GGCAAACCGA AAACCTCGAT GCAATCACCG CGGTGGTGCT GGGCGGCACC AGCCTGTTTG GCGGTCGCGG CATTATTTTG GGCTCCCTGG TGGGGGCGGT GATTGTGGGT GTGTTCCGCA ACGGCCTGAC CCTGATGGGT GTGGCCTCGG TGTACCAGAC ATTGATCACC GGTATTTTGG TGATTCTGGC TGTCGCTGCC GACCAGATGT CGCGCAAGGG AGCACGCTGA
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Protein sequence | MSTTNKRPIP WGALGPWIAL AVTCLFFATQ SARFLSGENL SLVLQQVMVV GVLAIGQTLI ILTAGIDLSC GMVMALGGVV MTKFAVDYGL NPYAAIACGL GVTTGFGLLN GLLVTRIKLP PFIVTLGTLN IAFAITQIYS ESQTITNLPS VMTALGETFN LGSTEVSLGT VTMLLLYAMA WFVLRETAPG RHLYAVGNNP EAARLTGISV DRVLVIVYSL AGLFYGIAAM LSVARTGVGD PNAGQTENLD AITAVVLGGT SLFGGRGIIL GSLVGAVIVG VFRNGLTLMG VASVYQTLIT GILVILAVAA DQMSRKGAR
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