Gene Rfer_1902 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRfer_1902 
Symbol 
ID3963231 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodoferax ferrireducens T118 
KingdomBacteria 
Replicon accessionNC_007908 
Strand
Start bp2042213 
End bp2043172 
Gene Length960 bp 
Protein Length319 aa 
Translation table11 
GC content62% 
IMG OID637916722 
Productinner-membrane translocator 
Protein accessionYP_523159 
Protein GI89900688 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1172] Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0227487 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCCACGA CAAACAAACG CCCCATTCCC TGGGGAGCGC TTGGCCCCTG GATCGCATTG 
GCGGTCACTT GCCTGTTTTT TGCCACCCAG TCAGCGCGCT TTTTGAGCGG CGAAAACCTG
TCGCTGGTGC TGCAACAAGT GATGGTGGTA GGCGTATTGG CCATTGGCCA GACCCTGATC
ATTCTGACCG CCGGCATTGA CCTGTCGTGC GGCATGGTGA TGGCCCTGGG CGGCGTTGTC
ATGACCAAAT TTGCCGTCGA CTACGGCCTG AACCCCTACG CGGCCATTGC CTGCGGCCTG
GGCGTGACCA CCGGTTTTGG CCTGCTCAAC GGCCTGCTGG TGACGCGCAT CAAACTGCCT
CCTTTCATCG TGACGCTGGG CACCCTGAAC ATTGCCTTTG CCATCACCCA GATCTACTCT
GAGTCTCAAA CCATCACCAA CCTGCCCAGC GTCATGACCG CGCTGGGAGA GACCTTCAAT
CTTGGCAGCA CCGAAGTCAG CCTGGGCACG GTGACGATGT TGCTGCTGTA CGCCATGGCC
TGGTTTGTGC TGCGCGAAAC CGCGCCGGGA CGCCACCTGT ACGCCGTGGG CAACAACCCG
GAAGCGGCGC GCCTGACCGG CATCAGCGTG GACCGGGTGC TGGTGATTGT TTACTCGCTG
GCCGGCCTGT TTTACGGCAT TGCCGCCATG CTGTCGGTAG CGCGCACGGG GGTGGGCGAC
CCCAACGCCG GGCAAACCGA AAACCTCGAT GCAATCACCG CGGTGGTGCT GGGCGGCACC
AGCCTGTTTG GCGGTCGCGG CATTATTTTG GGCTCCCTGG TGGGGGCGGT GATTGTGGGT
GTGTTCCGCA ACGGCCTGAC CCTGATGGGT GTGGCCTCGG TGTACCAGAC ATTGATCACC
GGTATTTTGG TGATTCTGGC TGTCGCTGCC GACCAGATGT CGCGCAAGGG AGCACGCTGA
 
Protein sequence
MSTTNKRPIP WGALGPWIAL AVTCLFFATQ SARFLSGENL SLVLQQVMVV GVLAIGQTLI 
ILTAGIDLSC GMVMALGGVV MTKFAVDYGL NPYAAIACGL GVTTGFGLLN GLLVTRIKLP
PFIVTLGTLN IAFAITQIYS ESQTITNLPS VMTALGETFN LGSTEVSLGT VTMLLLYAMA
WFVLRETAPG RHLYAVGNNP EAARLTGISV DRVLVIVYSL AGLFYGIAAM LSVARTGVGD
PNAGQTENLD AITAVVLGGT SLFGGRGIIL GSLVGAVIVG VFRNGLTLMG VASVYQTLIT
GILVILAVAA DQMSRKGAR