Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rfer_1899 |
Symbol | |
ID | 3963228 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodoferax ferrireducens T118 |
Kingdom | Bacteria |
Replicon accession | NC_007908 |
Strand | - |
Start bp | 2039728 |
End bp | 2040957 |
Gene Length | 1230 bp |
Protein Length | 409 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637916719 |
Product | ROK |
Protein accession | YP_523156 |
Protein GI | 89900685 |
COG category | [G] Carbohydrate transport and metabolism [K] Transcription |
COG ID | [COG1940] Transcriptional regulator/sugar kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.0996868 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCCCAC CGCGCGCCGC CCCAACCGCT GAAGCTCCTG CCCTGCTGCG CCCGCGTGGC TCCAACCACG TGGGCATGCG CCAGTTCAAT GAGCGGGTGG TACTGCAGGC GATCCGGCTC AACGGCAGTC TGCCCAAAGC GGATTTGGCG CGTCTTACCG GCCTCACCGC GCAAACCATC GGACTCATCA CCACCCGGCT GGTCGAGGAC GGTTTGATTC TCAAGCAAGA CCGCGTGCGC GGGCGCATTG GGCAACCCTC GGTACCGCTG TCGCTCAACC CGGACGGCGC GTTTGCCATT GGCATCAAGA TTGGACGGCG CAGTGCCGAC TGGTTGATGG TGGACTTCTG CGGCCAGGTG CGCCAGCGCC AAAGCCTGGA CTATGCCTTT CCCGATGCCC ATTCGCTGCT ACCCGACATC AAGGAGCGAC TGCAGGCCAT GGGTGACCAA CTCGGTGCTT TGAAAGACCG CCTGGTCGGC GTGGGCGTGG CGGCCCCCTT TCAACTGGGC GGCTGGCACA AGATGCTGGG CCTGTCCGAG GCCCAGTCAG AAACCTGGAA CCAGATTGAC CTGCGTGCCC AAGTGCAGGC CATGACCAAC ACACCCGTCA GCTTTGCCAA AGACACCTCG GCTGCTTGTG TGGCCGAACT GGTGGCCGGG CGCGGGCGCG ACCTGAAGAA TTTTTTATAT GTGTTTGTCG ACACCTTTGT GGGCGGCGGG CTGGTCATCA ACTCGCACTT GCATGGCGGT TTACACGGCA ATGCGGGAGC GGTGGCCTCG CTGCCCTGCG GCATGGCACA GGGCGACACA CCGCCCCCAC AACTGATTCA CCATGCGTCG CTGTGGGAAC TGGAGCAGCG CCTGACGGCC AAGGGGCTGG ACCCCCACGC CGCCTATGAC GACCGCGCCC TGGCGACGCC GTTTGAGGCT GAAACCCAGG CGTGGCTCAA GCAGGCCGCC AACGCGCTGG CCCATGCGGT GGTGAGTGGC ACGGCATTTC TGGACATCGA CGCGGTGGTG ATCGACGGCT CGTTTTGCCG ACCGCTGCTG ACCCTCCTGA TCGCGCAAAC CCAGCAAGCA CTCAAGCGCT ACAACTGGGA GGGCCTGTGG CCTGCCAACG TGATCGCGGG CAATGTGGGC CCTGATGCCC GCGCACTGGG CGGCGCGCTG ATGCCGCTGC ACGCCAACTT TGCGCCCGAT CAGGACTTGT TCTTGAAAGT TGGCGCTTAA
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Protein sequence | MTPPRAAPTA EAPALLRPRG SNHVGMRQFN ERVVLQAIRL NGSLPKADLA RLTGLTAQTI GLITTRLVED GLILKQDRVR GRIGQPSVPL SLNPDGAFAI GIKIGRRSAD WLMVDFCGQV RQRQSLDYAF PDAHSLLPDI KERLQAMGDQ LGALKDRLVG VGVAAPFQLG GWHKMLGLSE AQSETWNQID LRAQVQAMTN TPVSFAKDTS AACVAELVAG RGRDLKNFLY VFVDTFVGGG LVINSHLHGG LHGNAGAVAS LPCGMAQGDT PPPQLIHHAS LWELEQRLTA KGLDPHAAYD DRALATPFEA ETQAWLKQAA NALAHAVVSG TAFLDIDAVV IDGSFCRPLL TLLIAQTQQA LKRYNWEGLW PANVIAGNVG PDARALGGAL MPLHANFAPD QDLFLKVGA
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