Gene Rfer_1899 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRfer_1899 
Symbol 
ID3963228 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodoferax ferrireducens T118 
KingdomBacteria 
Replicon accessionNC_007908 
Strand
Start bp2039728 
End bp2040957 
Gene Length1230 bp 
Protein Length409 aa 
Translation table11 
GC content64% 
IMG OID637916719 
ProductROK 
Protein accessionYP_523156 
Protein GI89900685 
COG category[G] Carbohydrate transport and metabolism
[K] Transcription 
COG ID[COG1940] Transcriptional regulator/sugar kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0996868 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCCCAC CGCGCGCCGC CCCAACCGCT GAAGCTCCTG CCCTGCTGCG CCCGCGTGGC 
TCCAACCACG TGGGCATGCG CCAGTTCAAT GAGCGGGTGG TACTGCAGGC GATCCGGCTC
AACGGCAGTC TGCCCAAAGC GGATTTGGCG CGTCTTACCG GCCTCACCGC GCAAACCATC
GGACTCATCA CCACCCGGCT GGTCGAGGAC GGTTTGATTC TCAAGCAAGA CCGCGTGCGC
GGGCGCATTG GGCAACCCTC GGTACCGCTG TCGCTCAACC CGGACGGCGC GTTTGCCATT
GGCATCAAGA TTGGACGGCG CAGTGCCGAC TGGTTGATGG TGGACTTCTG CGGCCAGGTG
CGCCAGCGCC AAAGCCTGGA CTATGCCTTT CCCGATGCCC ATTCGCTGCT ACCCGACATC
AAGGAGCGAC TGCAGGCCAT GGGTGACCAA CTCGGTGCTT TGAAAGACCG CCTGGTCGGC
GTGGGCGTGG CGGCCCCCTT TCAACTGGGC GGCTGGCACA AGATGCTGGG CCTGTCCGAG
GCCCAGTCAG AAACCTGGAA CCAGATTGAC CTGCGTGCCC AAGTGCAGGC CATGACCAAC
ACACCCGTCA GCTTTGCCAA AGACACCTCG GCTGCTTGTG TGGCCGAACT GGTGGCCGGG
CGCGGGCGCG ACCTGAAGAA TTTTTTATAT GTGTTTGTCG ACACCTTTGT GGGCGGCGGG
CTGGTCATCA ACTCGCACTT GCATGGCGGT TTACACGGCA ATGCGGGAGC GGTGGCCTCG
CTGCCCTGCG GCATGGCACA GGGCGACACA CCGCCCCCAC AACTGATTCA CCATGCGTCG
CTGTGGGAAC TGGAGCAGCG CCTGACGGCC AAGGGGCTGG ACCCCCACGC CGCCTATGAC
GACCGCGCCC TGGCGACGCC GTTTGAGGCT GAAACCCAGG CGTGGCTCAA GCAGGCCGCC
AACGCGCTGG CCCATGCGGT GGTGAGTGGC ACGGCATTTC TGGACATCGA CGCGGTGGTG
ATCGACGGCT CGTTTTGCCG ACCGCTGCTG ACCCTCCTGA TCGCGCAAAC CCAGCAAGCA
CTCAAGCGCT ACAACTGGGA GGGCCTGTGG CCTGCCAACG TGATCGCGGG CAATGTGGGC
CCTGATGCCC GCGCACTGGG CGGCGCGCTG ATGCCGCTGC ACGCCAACTT TGCGCCCGAT
CAGGACTTGT TCTTGAAAGT TGGCGCTTAA
 
Protein sequence
MTPPRAAPTA EAPALLRPRG SNHVGMRQFN ERVVLQAIRL NGSLPKADLA RLTGLTAQTI 
GLITTRLVED GLILKQDRVR GRIGQPSVPL SLNPDGAFAI GIKIGRRSAD WLMVDFCGQV
RQRQSLDYAF PDAHSLLPDI KERLQAMGDQ LGALKDRLVG VGVAAPFQLG GWHKMLGLSE
AQSETWNQID LRAQVQAMTN TPVSFAKDTS AACVAELVAG RGRDLKNFLY VFVDTFVGGG
LVINSHLHGG LHGNAGAVAS LPCGMAQGDT PPPQLIHHAS LWELEQRLTA KGLDPHAAYD
DRALATPFEA ETQAWLKQAA NALAHAVVSG TAFLDIDAVV IDGSFCRPLL TLLIAQTQQA
LKRYNWEGLW PANVIAGNVG PDARALGGAL MPLHANFAPD QDLFLKVGA