| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_1894 |
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| Symbol | |
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| ID | 3963223 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | - |
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| Start bp | 2033035 |
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| End bp | 2034222 |
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| Gene Length | 1188 bp |
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| Protein Length | 395 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637916714 |
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| Product | major facilitator transporter |
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| Protein accession | YP_523151 |
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| Protein GI | 89900680 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAACTTT TTTTTCGTCA GGCCGGCCAA CAGGCGTCCC GGCCCATCGT CTGGCTGATC
GGCTTTTTTG CCTTTCTGAA TGTCTACTCC ATGCAGGCGG TGCTGCCCAT GGTGATGCAG
GATTTTCACG CCTCACCCGT GCAAGCCGGG TTGACGGTGG GGGCAACCGT GCTGGCGGTG
GCGCTCGTAT CTCCCTTCAT GGGCATGCTC TCCGACGCCT TCGGACGCAA AGTCATCATC
TGCGCCTCCC TGTTCGCCCT GACGGTGCCG ACGGCCCTGA TCCCTGTGGC CGGCAGCCTG
AACGCGCTGA TTTTCCTGCG CTTCCTTCAG GGGCTGGCGG TTCCTGGCAT CGTGGTGGTC
CTGATCGCCT ACCTGTCCGA GGAATTCCAT TCGGGCGGGG TCGCCCGTAT GACCGCCACC
TATGTGGGCG GCACCGTCAT GGGTGGCTTT TGCGGCCGTT TTATCACGGG CCACGCCGGT
CATTTGTTGG GCTGGCGCGG TGCGTTCGTC ACGCTGGCCC TACTGAATCT TTTTGGGGCT
TTGCTGGTGC TGTGGCTGCT GCCTCCCTCG CGTTACTTTG TTGCCAACCG AAATATCAGA
GCGGGGTTTG GCACGCTGTG GCGTCACCTG CATCACAAGC GACTGATGGC GGCTTGTGCC
GTGGGTTTCT GCGTGCTGTT CTCGCTGGTG GGCACTTTCA CCTATGTCAA CCTGCACCTG
GCATCAAGCC CTTTCAATCT CTCTTCCGCT GGCTTGGCCA ATGTTTTCAG CGTCTATCTG
GTGGGTGTTC TGGCGACCCC GCTGGCAGGG CCGTATGTTG TCCGGTTCGG TTTTCTGAGG
TCACTCCTGG GGGCTTTGGC CCTGTCCGCC GCTGGCTTGT CGCTGACCCT GTTGCCCTCC
TTGACTGCGG TCATCATCGG CCTGACGGTG TGTTCAACAG GCGTCTTCAT TTGCCAGTCG
GCCACCCTCA GCGCGATCGC TCAAAACGTC AGCGAGGGAC GCTCCCTGGC CACGGGCATT
TACTACATGA GCTACTACGC GGGCGGCGCG GCTGGCTCAT TGCTGGCTGG GATGGCCTAC
GAAGGCTGGG GTTGGGGCGG CTCGGTGTTG TCCATCGCAC TGATGCAGGC GCTGGCCGCC
GTCATTGCAG CTGTCGCCTG GCGTCAGCCA GCTCAAAGCG GGGGTTGA
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| Protein sequence | MQLFFRQAGQ QASRPIVWLI GFFAFLNVYS MQAVLPMVMQ DFHASPVQAG LTVGATVLAV
ALVSPFMGML SDAFGRKVII CASLFALTVP TALIPVAGSL NALIFLRFLQ GLAVPGIVVV
LIAYLSEEFH SGGVARMTAT YVGGTVMGGF CGRFITGHAG HLLGWRGAFV TLALLNLFGA
LLVLWLLPPS RYFVANRNIR AGFGTLWRHL HHKRLMAACA VGFCVLFSLV GTFTYVNLHL
ASSPFNLSSA GLANVFSVYL VGVLATPLAG PYVVRFGFLR SLLGALALSA AGLSLTLLPS
LTAVIIGLTV CSTGVFICQS ATLSAIAQNV SEGRSLATGI YYMSYYAGGA AGSLLAGMAY
EGWGWGGSVL SIALMQALAA VIAAVAWRQP AQSGG
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