Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rfer_1885 |
Symbol | |
ID | 3962263 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodoferax ferrireducens T118 |
Kingdom | Bacteria |
Replicon accession | NC_007908 |
Strand | + |
Start bp | 2021630 |
End bp | 2022013 |
Gene Length | 384 bp |
Protein Length | 127 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 637916705 |
Product | invasion gene expression up-regulator, SirB |
Protein accession | YP_523142 |
Protein GI | 89900671 |
COG category | [S] Function unknown |
COG ID | [COG3094] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.079472 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGACTATC TTTTTGTGAA ATATCTGCAC GTCACTTGTG TCGTGCTCAG TGTCAGCCTG TTTGTTTTGC GTGGCTCGCT GGAGCTGTTG GCACAGCCCT GGCGGCAGTG GCGACTGCTC AAGGTGGCGC CACATGTGAT CGACACCACG CTGCTGACGG CTGCGCTGTG GCTGGCCTGG CGCATCGGGC AATACCCATT TGTGAATGGC TGGCTCACGG CCAAGGTGCT GGCGTTGTTG GCGTACATCC TGCTGGGCAT GCGCGCCCTG GGCAAGCGCA CACCGCAGGA GCAACGTTTG CCGTTTTTTC TGGGGGCGTT GCTGAGCGTT GGCTACATTG TCGGCGTGGC GCTCACCCAT TCGCCCAGTT GGGGTTTGCT GTGA
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Protein sequence | MDYLFVKYLH VTCVVLSVSL FVLRGSLELL AQPWRQWRLL KVAPHVIDTT LLTAALWLAW RIGQYPFVNG WLTAKVLALL AYILLGMRAL GKRTPQEQRL PFFLGALLSV GYIVGVALTH SPSWGLL
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