Gene Rfer_1885 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRfer_1885 
Symbol 
ID3962263 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodoferax ferrireducens T118 
KingdomBacteria 
Replicon accessionNC_007908 
Strand
Start bp2021630 
End bp2022013 
Gene Length384 bp 
Protein Length127 aa 
Translation table11 
GC content60% 
IMG OID637916705 
Productinvasion gene expression up-regulator, SirB 
Protein accessionYP_523142 
Protein GI89900671 
COG category[S] Function unknown 
COG ID[COG3094] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.079472 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGACTATC TTTTTGTGAA ATATCTGCAC GTCACTTGTG TCGTGCTCAG TGTCAGCCTG 
TTTGTTTTGC GTGGCTCGCT GGAGCTGTTG GCACAGCCCT GGCGGCAGTG GCGACTGCTC
AAGGTGGCGC CACATGTGAT CGACACCACG CTGCTGACGG CTGCGCTGTG GCTGGCCTGG
CGCATCGGGC AATACCCATT TGTGAATGGC TGGCTCACGG CCAAGGTGCT GGCGTTGTTG
GCGTACATCC TGCTGGGCAT GCGCGCCCTG GGCAAGCGCA CACCGCAGGA GCAACGTTTG
CCGTTTTTTC TGGGGGCGTT GCTGAGCGTT GGCTACATTG TCGGCGTGGC GCTCACCCAT
TCGCCCAGTT GGGGTTTGCT GTGA
 
Protein sequence
MDYLFVKYLH VTCVVLSVSL FVLRGSLELL AQPWRQWRLL KVAPHVIDTT LLTAALWLAW 
RIGQYPFVNG WLTAKVLALL AYILLGMRAL GKRTPQEQRL PFFLGALLSV GYIVGVALTH
SPSWGLL