Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rfer_1882 |
Symbol | |
ID | 3962260 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodoferax ferrireducens T118 |
Kingdom | Bacteria |
Replicon accession | NC_007908 |
Strand | + |
Start bp | 2018400 |
End bp | 2019563 |
Gene Length | 1164 bp |
Protein Length | 387 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 637916702 |
Product | OmpA/MotB |
Protein accession | YP_523139 |
Protein GI | 89900668 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG2885] Outer membrane protein and related peptidoglycan-associated (lipo)proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.0874277 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAATTAG CTAGAACCAA ATTGGCAAGC GCCTCAGGCA AGCTGAGCTT GATTGCACTG GCCATCCTCG CCGGCCCGTT CGCACTGGCG GATGACTTAG GCTGGTACGC CGGGGCCAAT GTGGGCCGGT CCAGCGCGAC CATTGATGAC GCGCGCATCA CCAGTGGCCT GTTGGGCTCT GGCTTGACCA CGACCTCGAT TACCGATGAC AACCGTTCCA GTGGTTACAA GATTTTTGGC GGCTACCAGT TCAATCGGAA TTTCGCTGTT GAAGGCGGCT ATTTCGATCT GGGCAATTTT GGCTTCAATG CCAATACGGT GCCAACTGGA ACCTTGAGTG GCAACATCAA ACTCAAAGGC CTCAATCTTG ACCTCGTCGG TACCTTGCCT ATTTCAGAAA AGTTTTCTGT TTTGGGCCGC ATTGGTGTGA ACTACGCTGA TGCCGCCGAT TCCTTCGCCG GAACCGGAGC GGTCAATGTG CTCAATCCCA GCCCCAGCAA GCGTGAAACC AACCTCAAAG TGGGCGTCGG GCTGCAGTAT GCTTTCACCG ACGCACTGGC CATGCGAGCG GAGATTGAAC GCTACCGCAT CAATGATGCA GTGGGCAATA AGGGTGACAT TGATCTGGTC TCGCTCGGCC TGATCTATCG CTTTGGTGCA AAGACACCAA CTCCCGTGCC CGTGGCCTAC GTTGCGCCAC CGGTGGTGGT TGCCCAAGCG CCGCCGCCGG TGGAGGTGGC GCCGCCAGCG CCAGTGCCAG TGGTGGTGCC GCCACCAGCT CCAAAGAAGG TGTCCTTCTC TGCGGACTCT CTGTTTGACT TCGACAAGGC AAGCCTCAAG CCGACGGGCC AGCAGGACCT GGACAAGCTT GCGGCGGAGC TCAAGAACAC TCAATTTGAT GTCATCAAGG TCACCGGGCA TACCGACCGG ATCGGCTCGC ATGCCTACAA CCAGAAGCTC TCGGAGCGCC GCGCGGAGGC CGTCAAGGGC TACCTGATGA CGTCAATCGG GATTGCAGGC GACAAGATTG TGACCAAAGG CGTCGACGGC GCTGAGCCGG TGACGAAGCC GGGTGAATGC CAGGGCAAAA AAGTCAGCAA AGCGCTGATT GCCTGTTTGC AGCCTGATCG CCGGGTCGAA GTAGAAGTTG TCGGTACACG TTAA
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Protein sequence | MKLARTKLAS ASGKLSLIAL AILAGPFALA DDLGWYAGAN VGRSSATIDD ARITSGLLGS GLTTTSITDD NRSSGYKIFG GYQFNRNFAV EGGYFDLGNF GFNANTVPTG TLSGNIKLKG LNLDLVGTLP ISEKFSVLGR IGVNYADAAD SFAGTGAVNV LNPSPSKRET NLKVGVGLQY AFTDALAMRA EIERYRINDA VGNKGDIDLV SLGLIYRFGA KTPTPVPVAY VAPPVVVAQA PPPVEVAPPA PVPVVVPPPA PKKVSFSADS LFDFDKASLK PTGQQDLDKL AAELKNTQFD VIKVTGHTDR IGSHAYNQKL SERRAEAVKG YLMTSIGIAG DKIVTKGVDG AEPVTKPGEC QGKKVSKALI ACLQPDRRVE VEVVGTR
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