Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rfer_1867 |
Symbol | |
ID | 3960841 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodoferax ferrireducens T118 |
Kingdom | Bacteria |
Replicon accession | NC_007908 |
Strand | + |
Start bp | 2006503 |
End bp | 2007744 |
Gene Length | 1242 bp |
Protein Length | 413 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637916687 |
Product | D-3-phosphoglycerate dehydrogenase |
Protein accession | YP_523124 |
Protein GI | 89900653 |
COG category | [E] Amino acid transport and metabolism [H] Coenzyme transport and metabolism |
COG ID | [COG0111] Phosphoglycerate dehydrogenase and related dehydrogenases |
TIGRFAM ID | [TIGR01327] D-3-phosphoglycerate dehydrogenase |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATCCAGA AATCCATCGA CTCATCCGCC GCCAAAAGCG AACTTCAAGC CGTGTTGTTC GAGGGTATTC ACCCGTCTGC AGTCGAGGCG TTGGAGCAAG CTGGCTACAC GCGCATCGTG ACGCATGCCA AGTCACTGTC CGGCGACGAA CTGCTGGCCG CCATTGCCGA TGCGCATTTT GTCGGGGTGC GCTCACGCAC CCAACTCACC GCCGAAGTTC TGCAGCACGC GCGCCAACTG GTTGCCGTCG GCTGCTTTTG CATTGGCACC AACCAGGTTG ACCTGAAGGA AGCCATGCGC TTGGGCGTTC CCGTCTTCAA TGCCCCGTTT TCCAACACCC GCAGTGTGGC CGAGCTGGTG CTGGCGCAGA TCATCATGCT GATGCGCGGC ATTCCGGAAA AGAACGCGGT TCTGCACCGC GGTGGCTGGG TCAAGAGCGC GGCCGATTCT TTTGAAGTGC GCGGCAAGAC GTTGGGCATC ATCGGCTATG GCCACATCGG CACACAAATT GGCGTGCTGG CCGAGCAGCT CGGCATGCGC GTGATATTTA CCGACATTGA GGCCAAGCTG CCGCTGGGCA ACGCGCAGCC CATGAGCAGC CTCGAAGCCC TGCTGAGCGC GGCCGATGTC GTCACCCTGC ATGTGCCTGA AACGCCGCAG ACGGCCCTCA TGATCGGCGC GGCGCAACTG GCTGCCATGA AGCCGGGCAG TCACCTGATC AATGCGTCGC GCGGCAGCGT GGTCGATATT GAGGCGCTTA CCGTGGCGCT GGAGAGCCGG CATCTGCACG GCGCCGCCAT TGATGTTTTT CCGATCGAAC CGCAAGGCAA CGATTCAGTC TTTGTCTCGC CATTGACGCG CTTTGACAAC GTGATCCTGA CGCCGCACAT TGGCGGCTCC ACGCTGGAGG CGCAGATCAA CATCGGCACG GAAGTCGCTG CCAAGCTGAT TCGCTACAGC AGCAACGGTT CCACCACGTC GGCCGTCAAC TTTCCCGAAG TGGCATTGCC CGCCCATACC GGGCGCAGCC GCTTGCTGCA CATTCACCAC AACGTGCCTG GGGTCATGGC GCATGTCAAC GAGCGCTTAT CAGAGGCAGG CATCAACATC GCGGCGCAGT ACCTGAGCAC CAACGAGGAA GTCGGTTATG TGGTGATCGA CGTGGACAGC GCGGCGAGCC AGGTGGCACT CGATGAACTC TGCGCGGTGC CGGAAACGAT CCGTTGTCGC ATTTTGTATT GA
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Protein sequence | MIQKSIDSSA AKSELQAVLF EGIHPSAVEA LEQAGYTRIV THAKSLSGDE LLAAIADAHF VGVRSRTQLT AEVLQHARQL VAVGCFCIGT NQVDLKEAMR LGVPVFNAPF SNTRSVAELV LAQIIMLMRG IPEKNAVLHR GGWVKSAADS FEVRGKTLGI IGYGHIGTQI GVLAEQLGMR VIFTDIEAKL PLGNAQPMSS LEALLSAADV VTLHVPETPQ TALMIGAAQL AAMKPGSHLI NASRGSVVDI EALTVALESR HLHGAAIDVF PIEPQGNDSV FVSPLTRFDN VILTPHIGGS TLEAQINIGT EVAAKLIRYS SNGSTTSAVN FPEVALPAHT GRSRLLHIHH NVPGVMAHVN ERLSEAGINI AAQYLSTNEE VGYVVIDVDS AASQVALDEL CAVPETIRCR ILY
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