Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rfer_1865 |
Symbol | |
ID | 3960839 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodoferax ferrireducens T118 |
Kingdom | Bacteria |
Replicon accession | NC_007908 |
Strand | + |
Start bp | 2005389 |
End bp | 2005949 |
Gene Length | 561 bp |
Protein Length | 186 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 637916685 |
Product | nitrogen-fixing NifU-like |
Protein accession | YP_523122 |
Protein GI | 89900651 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0694] Thioredoxin-like proteins and domains |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCAAAAA TCGCTGAAAT TGAAGACACA CCGAACCCGA ATGCGAGGAA GTTTGTCTTG CGCGAGCCGC TCACCTGGGG TATCGCCCAT TCGTATGAAA ATGCCGAGCA GGCCCAGGGC GATGCACTGG CCAGCGCGCT GTTCGCCATT GATCATGTAA CCAACGTTTT CTATATTGAC CGCTGGCTTA CCGTGACGCA GGATGGCCAG GCCAACTGGG ACGCGTTGGT GCGCGAAATT GCGGTTCCCT TGCGGGCCGC GCCAGCAGCC AGTGAGCAGT CGGCTGCAGC CGTTTTTGAA GCGCGGGCCC ACGTGGCGGA TCTGAGCGCG CAAGACCGAC AGCGTTTGGA CGACATTGAG TTGATACTGG ACCAGGAGAT CCGGCCTTAC CTGCAAAGTG ACGGTGGTGA CCTGCACATT CTTGGCCTCG CTGGCAACCA GCTCATCGTG CACTACCAGG GCGCGTGCGG CACCTGCCCG AGCGCGATCT CAGGGACCCT GCAAGGCATT GAGAGCCGGC TGCGCACCTT GGAACCCGAC ATCGAAGTGA TCGCCGCCTA G
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Protein sequence | MPKIAEIEDT PNPNARKFVL REPLTWGIAH SYENAEQAQG DALASALFAI DHVTNVFYID RWLTVTQDGQ ANWDALVREI AVPLRAAPAA SEQSAAAVFE ARAHVADLSA QDRQRLDDIE LILDQEIRPY LQSDGGDLHI LGLAGNQLIV HYQGACGTCP SAISGTLQGI ESRLRTLEPD IEVIAA
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