Gene Rfer_1864 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRfer_1864 
Symbol 
ID3960838 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodoferax ferrireducens T118 
KingdomBacteria 
Replicon accessionNC_007908 
Strand
Start bp2004870 
End bp2005358 
Gene Length489 bp 
Protein Length162 aa 
Translation table11 
GC content64% 
IMG OID637916684 
ProductSUF system FeS assembly protein 
Protein accessionYP_523121 
Protein GI89900650 
COG category[C] Energy production and conversion 
COG ID[COG0822] NifU homolog involved in Fe-S cluster formation 
TIGRFAM ID[TIGR01994] SUF system FeS assembly protein, NifU family 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.861958 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTGCCG ATCCCAAGGC CCTGTACCAG GAAGTGATCC TGGACCACAA CCGCAAGCCG 
CGCAACTACG GCGAGCTCGA TCACCCCAGC CACCATGCCG AAGGGGTTAA TCCCCTCTGC
GGCGACCACA TTCACGTCGC GCTGGATCTC AAAGGTGACA GCGTCGAGCG CATCGCCTTT
CACGGCGAAT CGTGCGCCAT CTGCAAGGCG TCGGCGTCGA TGATGACGGT GGCGGTCAAG
GGCAAGAGCG CGATCGAGGC CAAAACGCTG ATTCACGAGT TTGTCGATAT GGCGACCGGC
CGCATCGCCG CCAAGGACAG CCCGCATATC GGCCGCTTGG CGGTCTTTTC CGGCATCAGT
GAGCTGCCGA TGCGCGTGAA GTGCGCCATT TTGCCGTGGC ACACGCTGCA GGCGGCGTTC
AACGCCGAGC CCAGCGCGTC GACCGAGGCT GAGGCCGACC CGATGCACAC GCCCTTGGGC
GACGCGTGA
 
Protein sequence
MSADPKALYQ EVILDHNRKP RNYGELDHPS HHAEGVNPLC GDHIHVALDL KGDSVERIAF 
HGESCAICKA SASMMTVAVK GKSAIEAKTL IHEFVDMATG RIAAKDSPHI GRLAVFSGIS
ELPMRVKCAI LPWHTLQAAF NAEPSASTEA EADPMHTPLG DA