| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_1855 |
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| Symbol | |
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| ID | 3960829 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | + |
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| Start bp | 1996497 |
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| End bp | 1997675 |
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| Gene Length | 1179 bp |
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| Protein Length | 392 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637916675 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_523112 |
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| Protein GI | 89900641 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1174] ABC-type proline/glycine betaine transport systems, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGTCAAAA ACCGCGTAGT GGCTGTGCTG GTCCTGGCTG GCCTGGTTGC AGCGCTGGGC
TTGCCATTTT TGACGCACGC GCCCAATCGA CTGGCCGCTG GCACCGGTAT ACCGCTGGCG
CAACTTGTCA GCGCCACAGC GGGCCGCCCC ATCGGCTCCT GGTTGGCCTG GCTGGTCTTG
CTGCCCGCCC TGTTGCTGGT GCTAGCCATT TTCACGCGCC CGACGCGCAG CACACAGATG
ATTGTTTGCC TGGCGGCAAC GCTGCTGCTG ACTGGCCTGG CGGGGCTGGC GGCGGACCAC
GCAACGCAGC TGGCGGGCCA GTCGGGCGCG ATCGCCCGCA CGTCCCTGGG CGGTGCGTTC
TGGCTGCTGG CCGTTTTCAG CTGGCTGGCG GCGGCCGACG CGATACAGCG GCTGGCCTTG
AAGCCGAGCT GGCGCCTGCT TGGCGCCGGC GTCGTCATCG TGCCGCTGGG GCTGCTGCTT
GGCGGCGGCG CGTTCAAGGA TTTGTCGCTG CTCAAGGAAT ACGCCAACCG GCAGGATGTC
TTCACCACGG CGTTGTGGCA GCATGTGCAA ATTGTGCTGG CCAGCCTGCT GCCCGCGTTG
CTGATTGGCG TGCCGCTGGG CCTGGCGTCA AACAGGTCGC GCGCGCTGCG CCCACCCTTG
TTTGCCGTGC TCAACGTGAT TCAAACCGTG CCCTCGATTG CGCTGTTTGG CTTGCTGATG
GCGCCGCTGG CGCTGCTGGC AGCCAGCGTG CCGGTGCTGG CCCAACTGGG CATCAAGGGC
ATAGGCCTGG CCCCGGCCGT GATTGCCCTG ACGCTGTATG CCCTGCTGCC GGTCGTGCGC
AGCACCGCCG CCGGGCTGAG CCAGGTGCCT GCGCCGGTGA TTGAAGCGGC GCGCGGCATG
GGCTTGACGG CGCGGCAGAT TTTCTGGCGC GTCGAGCTGC CCCTGGCCTT GCCGATTTTT
CTCTCGGGGC TGCGCGTGGC CACGGTCCAG ACCATTGGCA TGGCGGTGGT GGCGGCCTTG
ATCGGCGCGG GCGGTTTCGG CGCCATCGTG TTTCAGGGTT TGCTCAGCGG TGCGCTCGAT
CTGGTGCTGC TCGGCGTGCT GCCGGTGGTG GCCATGGCCG TGGCGGTGGA CGCCTTGCTC
AAGGCCCTTG CCCTGGCGCT GGAGCCCGAC AATGATTGA
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| Protein sequence | MVKNRVVAVL VLAGLVAALG LPFLTHAPNR LAAGTGIPLA QLVSATAGRP IGSWLAWLVL
LPALLLVLAI FTRPTRSTQM IVCLAATLLL TGLAGLAADH ATQLAGQSGA IARTSLGGAF
WLLAVFSWLA AADAIQRLAL KPSWRLLGAG VVIVPLGLLL GGGAFKDLSL LKEYANRQDV
FTTALWQHVQ IVLASLLPAL LIGVPLGLAS NRSRALRPPL FAVLNVIQTV PSIALFGLLM
APLALLAASV PVLAQLGIKG IGLAPAVIAL TLYALLPVVR STAAGLSQVP APVIEAARGM
GLTARQIFWR VELPLALPIF LSGLRVATVQ TIGMAVVAAL IGAGGFGAIV FQGLLSGALD
LVLLGVLPVV AMAVAVDALL KALALALEPD ND
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